RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ESM1Q9NQ30 184 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 C11orf21Q9P2W6 132 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 RNF114Q9Y508 228 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 LENEPQ9Y5L5 61 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 SELENOKQ9Y6D0 94 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 SVEP1Q4LDE5 3571 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 CELSR1Q9NYQ6 3014 aa8.05□□□□□ -1.12
CLCN6-208ENST00000494028 FABP5P3A8MUU1 101 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 LGALS9O00182 355 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 ZNF324O75467 553 aaPredicted RBP8.04□□□□□ -1.12
CLCN6-208ENST00000494028 ZNF705DP0CH99 300 aaPredicted RBP8.04□□□□□ -1.12
CLCN6-208ENST00000494028 ZNF705BP0CI00 300 aaPredicted RBP8.04□□□□□ -1.12
CLCN6-208ENST00000494028 PMCHP20382 165 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 HOXD3P31249 432 aaPredicted RBP8.04□□□□□ -1.12
CLCN6-208ENST00000494028 PAFAH1B2P68402 229 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 SAMD13Q5VXD3 122 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 Q6ZSV7 163 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 C18orf65Q6ZTR6 163 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 ZFAND2AQ8N6M9 145 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 DCANP1Q8TF63 244 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 URB1-AS1Q96HZ7 61 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 FAM19A4Q96LR4 140 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 CNFNQ9BYD5 112 aa8.04□□□□□ -1.12
CLCN6-208ENST00000494028 FLNAP21333 2647 aaKnown RBP8.04□□□□□ -1.12
CLCN6-208ENST00000494028 MAP1AP78559 2803 aaPredicted RBP8.03□□□□□ -1.12
CLCN6-208ENST00000494028 ZFHX3Q15911 3703 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 IGKV3-7A0A075B6H7 116 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 IGKV3D-20A0A0C4DH25 116 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 AMTP48728 403 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 SYNJ2BPP57105 145 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 ZNF493Q6ZR52 646 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 APRG1Q8IVJ8 170 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 KLHDC1Q8N7A1 406 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 OR8A1Q8NGG7 326 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 OR10J6PQ8NGY7 276 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 SAMD10Q9BYL1 202 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 GSN-AS1Q9NRJ2 163 aa8.03□□□□□ -1.12
CLCN6-208ENST00000494028 C2orf70A6NJV1 201 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 F6UB75 175 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 ORM1P02763 201 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 SRD5A1P18405 259 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 SLURP1P55000 103 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 DEFB136Q30KP8 78 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 TCTEX1D4Q5JR98 221 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 NIT1Q86X76 327 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 C4orf3Q8WVX3 66 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 LINC00477Q96M19 166 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 YAE1D1Q9NRH1 226 aa8.02□□□□□ -1.13
CLCN6-208ENST00000494028 K7EQG2 157 aa8.01□□□□□ -1.13
CLCN6-208ENST00000494028 M0QZ24 198 aa8.01□□□□□ -1.13
CLCN6-208ENST00000494028 GPX1P07203 203 aa8.01□□□□□ -1.13
CLCN6-208ENST00000494028 RPL11P62913 178 aaKnown RBP8.01□□□□□ -1.13
CLCN6-208ENST00000494028 RNASEKQ6P5S7 137 aaKnown RBP8.01□□□□□ -1.13
CLCN6-208ENST00000494028 Q6ZQT7 251 aa8.01□□□□□ -1.13
CLCN6-208ENST00000494028 MUC21A0A0G2JKD1 596 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 TRBV7-9A0A0J9YWB2 115 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 MUC21A0A140T8X8 626 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 MUC21Q5SSG8 566 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 DMRTA1Q5VZB9 504 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 ADAMTSL5Q6ZMM2 481 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 AMN1Q8IY45 258 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 Q8N976 141 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 MS4A6AQ9H2W1 248 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 NAGKQ9UJ70 344 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 U3KQK5 164 aa8□□□□□ -1.13
CLCN6-208ENST00000494028 MAST4O15021 2626 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 LINC00587B1AMM8 73 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 LINC01619G3V211 115 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 SNAI2O43623 268 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 HSBP1O75506 76 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 ZNF688P0C7X2 276 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 NTF3P20783 257 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 ID1P41134 155 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 KHDC1LQ5JSQ8 128 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 FAM104BQ5XKR9 115 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 FAM19A2Q8N3H0 131 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 KLHL30-AS1Q8NEE0 82 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 TLN2Q9Y4G6 2542 aa7.99□□□□□ -1.13
CLCN6-208ENST00000494028 ANK3Q12955 4377 aaKnown RBP7.99□□□□□ -1.13
CLCN6-208ENST00000494028 SONP18583 2426 aaKnown RBP7.98□□□□□ -1.13
CLCN6-208ENST00000494028 TRAV21A0A0B4J279 112 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 IGHV1-24A0A0C4DH33 117 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 KIR2DL5BA0A0G2JN68 375 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 KIR2DL5BA0A0G2JPC4 375 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 KLLNB2CW77 178 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 J3KRW8 73 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 RNASE1P07998 156 aaKnown RBP7.98□□□□□ -1.13
CLCN6-208ENST00000494028 CD33P20138 364 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 TFPI2P48307 235 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 MRPL51Q4U2R6 128 aaKnown RBP7.98□□□□□ -1.13
CLCN6-208ENST00000494028 WFDC3Q8IUB2 231 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 KIR2DL5AQ8N109 375 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 OR10AG1Q8NH19 301 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 CHCHD1Q96BP2 118 aaKnown RBP7.98□□□□□ -1.13
CLCN6-208ENST00000494028 RNF185Q96GF1 192 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 ODF3Q96PU9 254 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 TMEM191AQ9H0A3 160 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 TMEM160Q9NX00 188 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 ACANP16112 2415 aa7.98□□□□□ -1.13
CLCN6-208ENST00000494028 A0A0J9YX75 114 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms