RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 CENPWQ5EE01 88 aa10.93□□□□□ -0.66
ACTB-213ENST00000493945 SOHLH1Q5JUK2 328 aa10.93□□□□□ -0.66
ACTB-213ENST00000493945 COMMD7Q86VX2 200 aa10.93□□□□□ -0.66
ACTB-213ENST00000493945 TMEM183AQ8IXX5 376 aa10.93□□□□□ -0.66
ACTB-213ENST00000493945 SGK494Q96LW2 274 aa10.93□□□□□ -0.66
ACTB-213ENST00000493945 LINC00862A6NCI5 91 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 SMIM9A6NGZ8 99 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 ZNF727A8MUV8 499 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 SPRY2O43597 315 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 IGLV2-11P01706 119 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 SRP19P09132 144 aaKnown RBP10.92□□□□□ -0.66
ACTB-213ENST00000493945 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
ACTB-213ENST00000493945 DEFB135Q30KP9 77 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 GFI1BQ5VTD9 330 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 LINC00479Q96M42 142 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 PYGO2Q9BRQ0 406 aa10.92□□□□□ -0.66
ACTB-213ENST00000493945 TRAV12-2A0A075B6T6 113 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 GCGP01275 180 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 PFN1P07737 140 aaKnown RBP10.91□□□□□ -0.66
ACTB-213ENST00000493945 PRB4P10163 310 aaPredicted RBP10.91□□□□□ -0.66
ACTB-213ENST00000493945 NDUFA5Q16718 116 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 FAM162BQ5T6X4 162 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 Q6AWC8 147 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 ZFAND2AQ8N6M9 145 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 RNF183Q96D59 192 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 DAZAP1Q96EP5 407 aaKnown RBP10.91□□□□□ -0.66
ACTB-213ENST00000493945 KCNS1Q96KK3 526 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 LINC01587Q99440 93 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 LY96Q9Y6Y9 160 aa10.91□□□□□ -0.66
ACTB-213ENST00000493945 IGHV3OR16-12A0A075B7B8 117 aa10.9□□□□□ -0.66
ACTB-213ENST00000493945 TRAV12-3A0A0B4J271 114 aa10.9□□□□□ -0.66
ACTB-213ENST00000493945 FABP5P3A8MUU1 101 aa10.9□□□□□ -0.66
ACTB-213ENST00000493945 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.66
ACTB-213ENST00000493945 FAM159AQ6UWV7 190 aa10.9□□□□□ -0.66
ACTB-213ENST00000493945 COX8CQ7Z4L0 72 aa10.9□□□□□ -0.66
ACTB-213ENST00000493945 EIF4E3Q8N5X7 224 aaKnown RBP10.9□□□□□ -0.66
ACTB-213ENST00000493945 DNAH3Q8TD57 4116 aa10.9□□□□□ -0.67
ACTB-213ENST00000493945 MIFP14174 115 aa10.89□□□□□ -0.67
ACTB-213ENST00000493945 BTN1A1Q13410 526 aa10.89□□□□□ -0.67
ACTB-213ENST00000493945 RRN3P1Q2M238 152 aa10.89□□□□□ -0.67
ACTB-213ENST00000493945 NEU1Q99519 415 aa10.89□□□□□ -0.67
ACTB-213ENST00000493945 TM2D3Q9BRN9 247 aa10.89□□□□□ -0.67
ACTB-213ENST00000493945 DERL1Q9BUN8 251 aa10.89□□□□□ -0.67
ACTB-213ENST00000493945 TRGV11A0A075B6L2 103 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 TMEM189A5PLL7 270 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 CRXO43186 299 aaPredicted RBP10.88□□□□□ -0.67
ACTB-213ENST00000493945 SFTA3P0C7M3 94 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 ZNF705AQ6ZN79 300 aaPredicted RBP10.88□□□□□ -0.67
ACTB-213ENST00000493945 SBSPONQ8IVN8 264 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 OR11H2Q8NH07 326 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 C8orf49Q96NF6 230 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 SDF2L1Q9HCN8 221 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 NAT8Q9UHE5 227 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 NAGKQ9UJ70 344 aa10.88□□□□□ -0.67
ACTB-213ENST00000493945 IGHV1OR15-1A0A075B7D0 117 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 XKRY2A2RUG3 117 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 GIG44P09565 113 aaPredicted RBP10.87□□□□□ -0.67
ACTB-213ENST00000493945 PNRC1Q12796 327 aaPredicted RBP10.87□□□□□ -0.67
ACTB-213ENST00000493945 TMEM241Q24JQ0 296 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 PRR27Q6MZM9 219 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 ZNF493Q6ZR52 646 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 NHLRC2Q8NBF2 726 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 CSNK1G2-AS1Q8NCQ2 148 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 C16orf74Q96GX8 76 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 LINC00467Q9BRT7 94 aa10.87□□□□□ -0.67
ACTB-213ENST00000493945 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
ACTB-213ENST00000493945 CBY3A6NI87 242 aa10.86□□□□□ -0.67
ACTB-213ENST00000493945 TVP23CQ96ET8 276 aa10.86□□□□□ -0.67
ACTB-213ENST00000493945 ZC2HC1AQ96GY0 325 aa10.86□□□□□ -0.67
ACTB-213ENST00000493945 P01737 135 aa10.85□□□□□ -0.67
ACTB-213ENST00000493945 RPS20P60866 119 aaKnown RBP10.85□□□□□ -0.67
ACTB-213ENST00000493945 ZNF415Q09FC8 603 aa10.85□□□□□ -0.67
ACTB-213ENST00000493945 OR5I1Q13606 314 aa10.85□□□□□ -0.67
ACTB-213ENST00000493945 C15orf54Q8N8G6 183 aa10.85□□□□□ -0.67
ACTB-213ENST00000493945 TMEM263Q8WUH6 116 aaKnown RBP10.85□□□□□ -0.67
ACTB-213ENST00000493945 OVOL2Q9BRP0 275 aa10.85□□□□□ -0.67
ACTB-213ENST00000493945 MLST8Q9BVC4 326 aa10.85□□□□□ -0.67
ACTB-213ENST00000493945 SNURFLB1AK76 121 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 F8W036 122 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 SH2D1AO60880 128 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 ZNF324O75467 553 aaPredicted RBP10.84□□□□□ -0.67
ACTB-213ENST00000493945 ORM1P02763 201 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 HTN1P15515 57 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 SRSF3P84103 164 aaKnown RBP10.84□□□□□ -0.67
ACTB-213ENST00000493945 TDRG1Q3Y452 100 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 ANXA2RQ3ZCQ2 193 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 PRR9Q5T870 116 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 C1orf158Q8N1D5 194 aa10.84□□□□□ -0.67
ACTB-213ENST00000493945 TRBV20OR9-2A0A075B6H5 130 aa10.83□□□□□ -0.68
ACTB-213ENST00000493945 TMEM218A2RU14 115 aa10.83□□□□□ -0.68
ACTB-213ENST00000493945 B4DEV8 164 aa10.83□□□□□ -0.68
ACTB-213ENST00000493945 S100A4P26447 101 aaKnown RBP10.83□□□□□ -0.68
ACTB-213ENST00000493945 ADIRFQ15847 76 aa10.83□□□□□ -0.68
ACTB-213ENST00000493945 IBA57Q5T440 356 aaKnown RBP10.83□□□□□ -0.68
ACTB-213ENST00000493945 C11orf68Q9H3H3 251 aaKnown RBP10.83□□□□□ -0.68
ACTB-213ENST00000493945 ASIPP42127 132 aa10.82□□□□□ -0.68
ACTB-213ENST00000493945 ERVFC1-1P60608 527 aa10.82□□□□□ -0.68
ACTB-213ENST00000493945 KIR3DS1Q14943 382 aa10.82□□□□□ -0.68
ACTB-213ENST00000493945 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
ACTB-213ENST00000493945 MUC21Q5SSG8 566 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms