RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 KAAG1Q9UBP8 84 aa9.14□□□□□ -0.95
BRCA1-222ENST00000493919 LY6LH3BQJ8 138 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 SUPT4H1P63272 117 aaKnown RBP9.13□□□□□ -0.95
BRCA1-222ENST00000493919 LYRM7Q5U5X0 104 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 MOB3BQ86TA1 216 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 CD177Q8N6Q3 437 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 IMUPQ9GZP8 106 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 PEMTQ9UBM1 199 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 DOCK11Q5JSL3 2073 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 C15orf61A6NNL5 157 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 IGLL5B9A064 214 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 HOXB4P17483 251 aaPredicted RBP9.13□□□□□ -0.95
BRCA1-222ENST00000493919 PHLDA2Q53GA4 152 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 ABHD14BQ96IU4 210 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 HIGD1BQ9P298 99 aa9.13□□□□□ -0.95
BRCA1-222ENST00000493919 FAM120AOSQ5T036 256 aa9.12□□□□□ -0.95
BRCA1-222ENST00000493919 FAM19A2Q8N3H0 131 aa9.12□□□□□ -0.95
BRCA1-222ENST00000493919 ANKRD29Q8N6D5 301 aa9.12□□□□□ -0.95
BRCA1-222ENST00000493919 MXRA5Q9NR99 2828 aa9.12□□□□□ -0.95
BRCA1-222ENST00000493919 CSN1S1P47710 185 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 CARD19Q96LW7 228 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 C7orf69Q9H7B7 122 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 TRBV7-7A0A0K0K1E9 115 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 A8MWL6 223 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 OXTP01178 125 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 FOXA3P55318 350 aaPredicted RBP9.11□□□□□ -0.95
BRCA1-222ENST00000493919 FGF12P61328 243 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 PIGYQ3MUY2 71 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 FAM3DQ96BQ1 224 aa9.11□□□□□ -0.95
BRCA1-222ENST00000493919 RRHO14718 337 aa9.1□□□□□ -0.95
BRCA1-222ENST00000493919 TRACP01848 142 aa9.1□□□□□ -0.95
BRCA1-222ENST00000493919 PSMB8P28062 276 aa9.1□□□□□ -0.95
BRCA1-222ENST00000493919 EDDM3BP56851 147 aa9.1□□□□□ -0.95
BRCA1-222ENST00000493919 RPUSD1Q9UJJ7 312 aaKnown RBP9.1□□□□□ -0.95
BRCA1-222ENST00000493919 AVPP01185 164 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 SERF2P84101 59 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 SBSPONQ8IVN8 264 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 DLX4Q92988 240 aaPredicted RBP9.09□□□□□ -0.95
BRCA1-222ENST00000493919 DCTN5Q9BTE1 182 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 CD69Q07108 199 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 PMAIP1Q13794 54 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 EBI3Q14213 229 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 CD164L2Q6UWJ8 174 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 TNFRSF19Q9NS68 423 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 ANAPC10Q9UM13 185 aa9.09□□□□□ -0.95
BRCA1-222ENST00000493919 NAV3Q8IVL0 2385 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 TEX50A0A1B0GTY4 177 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 PSPNO60542 156 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 TMEM187Q14656 261 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 LINC01545Q5VT33 79 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 C1orf229Q6ZS94 237 aaPredicted RBP9.08□□□□□ -0.96
BRCA1-222ENST00000493919 TRAPPC6BQ86SZ2 158 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 C3orf56Q8N813 242 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 OR2T6Q8NHC8 308 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 CHCHD1Q96BP2 118 aaKnown RBP9.08□□□□□ -0.96
BRCA1-222ENST00000493919 KCNIP2Q9NS61 270 aa9.08□□□□□ -0.96
BRCA1-222ENST00000493919 IGHV3OR16-10A0A075B7F0 116 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 TRAV40A0A0B4J280 105 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 BMPR1BO00238 502 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 AMY1AP04745 511 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 LYPD6Q86Y78 171 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 MYOZ3Q8TDC0 251 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 C2CD3Q4AC94 2353 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 COX7CP15954 63 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 DLX1P56177 255 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 PRB3Q04118 309 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-222ENST00000493919 PAX8Q06710 450 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 CEND1Q8N111 149 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 IL1F10Q8WWZ1 152 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 C1orf147Q96MC9 270 aaPredicted RBP9.07□□□□□ -0.96
BRCA1-222ENST00000493919 TXNDC17Q9BRA2 123 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 MRPL20Q9BYC9 149 aaKnown RBP9.07□□□□□ -0.96
BRCA1-222ENST00000493919 JMJD1CQ15652 2540 aa9.07□□□□□ -0.96
BRCA1-222ENST00000493919 RBAKDNA6NC62 111 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 MGST3O14880 152 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 RPL13AP40429 203 aaKnown RBP9.06□□□□□ -0.96
BRCA1-222ENST00000493919 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
BRCA1-222ENST00000493919 C1orf100Q5SVJ3 147 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 Q6P435 159 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 LHFPL1Q86WI0 220 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 C11orf44Q8N8P7 122 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 C18orf15Q96N68 181 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 C11orf1Q9H5F2 150 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 LY96Q9Y6Y9 160 aa9.06□□□□□ -0.96
BRCA1-222ENST00000493919 TRAV13-1A0A0B4J241 112 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 IGHV1-24A0A0C4DH33 117 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 H7C1H1 209 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 SPINT2O43291 252 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 IGHV4-38-2P0DP08 117 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 VSIG8P0DPA2 414 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 CCL3L1P16619 93 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 VMO1Q7Z5L0 202 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 LY6G5BQ8NDX9 201 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
BRCA1-222ENST00000493919 P0DMU3 169 aa9.05□□□□□ -0.96
BRCA1-222ENST00000493919 FAM231AP0DMU4 169 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms