RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 NEGR1Q7Z3B1 354 aa10.67□□□□□ -0.7
VCP-207ENST00000493886 TEX48A0A1B0GUV7 120 aa10.67□□□□□ -0.7
VCP-207ENST00000493886 GLMPQ8WWB7 406 aa10.67□□□□□ -0.7
VCP-207ENST00000493886 AAMDCQ9H7C9 122 aa10.67□□□□□ -0.7
VCP-207ENST00000493886 ZNF785A8K8V0 405 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 SYS1-DBNDD2H3BUS1 97 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 TCTAP57738 103 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 GAGE5Q13069 117 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 GAGE6Q13070 117 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 MTURNQ8N3F0 131 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 CCDC140Q96MF4 163 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 MYO18BQ8IUG5 2567 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 CD300EQ496F6 205 aaPredicted RBP10.66□□□□□ -0.7
VCP-207ENST00000493886 C8orf49Q96NF6 230 aa10.66□□□□□ -0.7
VCP-207ENST00000493886 SOX21Q9Y651 276 aaPredicted RBP10.66□□□□□ -0.7
VCP-207ENST00000493886 NUDT3O95989 172 aa10.65□□□□□ -0.7
VCP-207ENST00000493886 CLEC19AQ6UXS0 136 aa10.65□□□□□ -0.7
VCP-207ENST00000493886 EEF1AKMT3Q96AZ1 226 aa10.65□□□□□ -0.7
VCP-207ENST00000493886 PEF1Q9UBV8 284 aaKnown RBP10.65□□□□□ -0.7
VCP-207ENST00000493886 ZFYVE26Q68DK2 2539 aa10.65□□□□□ -0.7
VCP-207ENST00000493886 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
VCP-207ENST00000493886 ZFAND3Q9H8U3 227 aa10.65□□□□□ -0.7
VCP-207ENST00000493886 TRAV41A0A0B4J266 112 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 FXYD7P58549 80 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 DSCR9P59020 149 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 VPREB3Q9UKI3 123 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 B4DSR2 109 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 CSN1S1P47710 185 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 LINC00527Q9UJ94 153 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 SMAD5-AS1Q9Y6J3 95 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 TRBV7-1A0A0A6YYK4 115 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 APOHP02749 345 aaPredicted RBP10.64□□□□□ -0.71
VCP-207ENST00000493886 CRIP2P52943 208 aaPredicted RBP10.64□□□□□ -0.71
VCP-207ENST00000493886 LY6EQ16553 131 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 C5orf47Q569G3 176 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 C19orf54Q5BKX5 351 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 IGFL4Q6B9Z1 124 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 GFRA4Q9GZZ7 299 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 VPS13CQ709C8 3753 aa10.64□□□□□ -0.71
VCP-207ENST00000493886 LOC389332A0A1B0GUA5 103 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 A0A1B0GUT8 65 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 CRIP1P50238 77 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 ZNF843Q8N446 348 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 DEFB125Q8N687 156 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 H3BUX3 64 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 ATP5G2Q06055 141 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
VCP-207ENST00000493886 MRPL16Q9NX20 251 aaKnown RBP10.63□□□□□ -0.71
VCP-207ENST00000493886 ZNF462Q96JM2 2506 aa10.62□□□□□ -0.71
VCP-207ENST00000493886 COX6B1P14854 86 aa10.62□□□□□ -0.71
VCP-207ENST00000493886 FAM106AQ4KMX7 169 aa10.62□□□□□ -0.71
VCP-207ENST00000493886 FAM231BA6NCW3 169 aa10.62□□□□□ -0.71
VCP-207ENST00000493886 ANXA2RQ3ZCQ2 193 aa10.62□□□□□ -0.71
VCP-207ENST00000493886 CHCHD1Q96BP2 118 aaKnown RBP10.62□□□□□ -0.71
VCP-207ENST00000493886 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
VCP-207ENST00000493886 TMEM213A2RRL7 107 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 A6NDX4 124 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.61□□□□□ -0.71
VCP-207ENST00000493886 BUB3O43684 328 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 AVPP01185 164 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
VCP-207ENST00000493886 SLC25A16P16260 332 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 SRSF1Q07955 248 aaKnown RBP eCLIP10.61□□□□□ -0.713e-6■■□□□ 12.5
VCP-207ENST00000493886 Q8TAT8 98 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 CLPSL1A2RUU4 121 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 NPFFR1Q9GZQ6 430 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 HAX1O00165 279 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 HIST1H1AQ02539 215 aaPredicted RBP10.61□□□□□ -0.71
VCP-207ENST00000493886 LOXL1Q08397 574 aaPredicted RBP10.61□□□□□ -0.71
VCP-207ENST00000493886 UFSP1Q6NVU6 142 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
VCP-207ENST00000493886 A1L4Q6 167 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 NCR2O95944 276 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 TRGV3P03979 118 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 IGF1P05019 195 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 BVES-AS1Q5T3Y7 98 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 PRSS3P2Q8NHM4 247 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 FOXE3Q13461 319 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 OR8A1Q8NGG7 326 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 FAM208BQ5VWN6 2430 aa10.6□□□□□ -0.71
VCP-207ENST00000493886 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.59□□□□□ -0.714e-7■■■■□ 26.3
VCP-207ENST00000493886 UTP20O75691 2785 aaKnown RBP10.59□□□□□ -0.71
VCP-207ENST00000493886 A0A087X0K7 114 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 IGHG2P01859 326 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 IGHG4P01861 327 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 CT45A10P0DMU9 189 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 HLA-DMBP28068 263 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 IFI27P40305 119 aaPredicted RBP10.59□□□□□ -0.71
VCP-207ENST00000493886 FAM162BQ5T6X4 162 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 IGHV3-66A0A0C4DH42 116 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 OR5AL1P0C617 328 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 SMIM17P0DL12 118 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 RIGQ13278 110 aa10.59□□□□□ -0.71
VCP-207ENST00000493886 FA2HQ7L5A8 372 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms