RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 Q6ZWC4 215 aa11.47□□□□□ -0.57
HPS4-216ENST00000493455 LINC01587Q99440 93 aa11.47□□□□□ -0.57
HPS4-216ENST00000493455 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
HPS4-216ENST00000493455 KLLNB2CW77 178 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 GCGP01275 180 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 S100A9P06702 114 aaKnown RBP11.46□□□□□ -0.57
HPS4-216ENST00000493455 SRP19P09132 144 aaKnown RBP11.46□□□□□ -0.57
HPS4-216ENST00000493455 SMUG1Q53HV7 270 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 CENPWQ5EE01 88 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 SAPCD1Q5SSQ6 148 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 BAGE2Q86Y30 109 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 C1orf158Q8N1D5 194 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 CSNK1G2-AS1Q8NCQ2 148 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 OR11H2Q8NH07 326 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 RNF183Q96D59 192 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 TM2D3Q9BRN9 247 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 OVOL2Q9BRP0 275 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 NAGKQ9UJ70 344 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 LENEPQ9Y5L5 61 aa11.46□□□□□ -0.57
HPS4-216ENST00000493455 FBN3Q75N90 2809 aa11.45□□□□□ -0.58
HPS4-216ENST00000493455 PGPEP1LA6NFU8 196 aa11.45□□□□□ -0.58
HPS4-216ENST00000493455 LTAP01374 205 aa11.45□□□□□ -0.58
HPS4-216ENST00000493455 MGST1P10620 155 aaKnown RBP11.45□□□□□ -0.58
HPS4-216ENST00000493455 GNG4P50150 75 aa11.45□□□□□ -0.58
HPS4-216ENST00000493455 MUC21Q5SSG8 566 aa11.45□□□□□ -0.58
HPS4-216ENST00000493455 PARLQ9H300 379 aa11.45□□□□□ -0.58
HPS4-216ENST00000493455 KLF12Q9Y4X4 402 aa11.45□□□□□ -0.58
HPS4-216ENST00000493455 TRBV7-9A0A0J9YWB2 115 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 ZNF705GA8MUZ8 300 aaPredicted RBP11.44□□□□□ -0.58
HPS4-216ENST00000493455 C9JQL5 133 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 TMEM250H0YL14 139 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 PRM2P04554 102 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 ZNF80P51504 273 aaPredicted RBP11.44□□□□□ -0.58
HPS4-216ENST00000493455 TAS2R60P59551 318 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 PRR27Q6MZM9 219 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 ZC2HC1AQ96GY0 325 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 ZFP30Q9Y2G7 519 aa11.44□□□□□ -0.58
HPS4-216ENST00000493455 TRBV6-1A0A0K0K1D8 114 aa11.43□□□□□ -0.58
HPS4-216ENST00000493455 DEFB4AO15263 64 aa11.43□□□□□ -0.58
HPS4-216ENST00000493455 SMIM7Q9BQ49 75 aa11.43□□□□□ -0.58
HPS4-216ENST00000493455 TMEM183AQ8IXX5 376 aa11.42□□□□□ -0.58
HPS4-216ENST00000493455 TMEM256Q8N2U0 113 aa11.42□□□□□ -0.58
HPS4-216ENST00000493455 TP53TG1Q9Y2A0 90 aa11.42□□□□□ -0.58
HPS4-216ENST00000493455 X6R8D5 127 aa11.42□□□□□ -0.58
HPS4-216ENST00000493455 TRBV20OR9-2A0A075B6H5 130 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 TRAV21A0A0B4J279 112 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 CBY3A6NI87 242 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 ZNF727A8MUV8 499 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 H7BYZ3 331 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 EMP1P54849 157 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 RRN3P1Q2M238 152 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 ZNF705AQ6ZN79 300 aaPredicted RBP11.41□□□□□ -0.58
HPS4-216ENST00000493455 C20orf144Q9BQM9 153 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 NBEAL2Q6ZNJ1 2754 aa11.41□□□□□ -0.58
HPS4-216ENST00000493455 SH2D1AO60880 128 aa11.4□□□□□ -0.58
HPS4-216ENST00000493455 ZNF324O75467 553 aaPredicted RBP11.4□□□□□ -0.58
HPS4-216ENST00000493455 PFN1P07737 140 aaKnown RBP11.4□□□□□ -0.58
HPS4-216ENST00000493455 NHLRC4P0CG21 123 aaPredicted RBP11.4□□□□□ -0.58
HPS4-216ENST00000493455 Q6AWC8 147 aa11.4□□□□□ -0.58
HPS4-216ENST00000493455 IGHV1OR15-1A0A075B7D0 117 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 IGHV4-28A0A0C4DH34 117 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 M0R036 132 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 SFTA3P0C7M3 94 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 AZU1P20160 251 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 FAM162BQ5T6X4 162 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 FAM159AQ6UWV7 190 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 TP53TG3Q9ULZ0 132 aa11.39□□□□□ -0.59
HPS4-216ENST00000493455 TMSB15BA0A087X1C1 80 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 FABP5P3A8MUU1 101 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 IGLV2-8P01709 118 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 ORM1P02763 201 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 CRIP1P50238 77 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 OR5I1Q13606 314 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 ANXA2RQ3ZCQ2 193 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 SOHLH1Q5JUK2 328 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 EIF4E3Q8N5X7 224 aaKnown RBP11.38□□□□□ -0.59
HPS4-216ENST00000493455 PYGO2Q9BRQ0 406 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 SMDT1Q9H4I9 107 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 U3KQK5 164 aa11.38□□□□□ -0.59
HPS4-216ENST00000493455 A0A0J9YWU9 116 aa11.37□□□□□ -0.59
HPS4-216ENST00000493455 LINC00862A6NCI5 91 aa11.37□□□□□ -0.59
HPS4-216ENST00000493455 C9JCJ5 164 aa11.37□□□□□ -0.59
HPS4-216ENST00000493455 MIFP14174 115 aa11.37□□□□□ -0.59
HPS4-216ENST00000493455 OCC1Q8TAD7 63 aa11.37□□□□□ -0.59
HPS4-216ENST00000493455 DAZAP1Q96EP5 407 aaKnown RBP11.37□□□□□ -0.59
HPS4-216ENST00000493455 MLST8Q9BVC4 326 aa11.37□□□□□ -0.59
HPS4-216ENST00000493455 C11orf21Q9P2W6 132 aa11.37□□□□□ -0.59
HPS4-216ENST00000493455 GNRH2O43555 120 aa11.36□□□□□ -0.59
HPS4-216ENST00000493455 NDUFS6O75380 124 aaKnown RBP11.36□□□□□ -0.59
HPS4-216ENST00000493455 Q8NAQ8 132 aa11.36□□□□□ -0.59
HPS4-216ENST00000493455 NEU1Q99519 415 aa11.36□□□□□ -0.59
HPS4-216ENST00000493455 SDF2L1Q9HCN8 221 aa11.36□□□□□ -0.59
HPS4-216ENST00000493455 TIMM8BQ9Y5J9 83 aaPredicted RBP11.36□□□□□ -0.59
HPS4-216ENST00000493455 PRKDCP78527 4128 aaKnown RBP11.35□□□□□ -0.59
HPS4-216ENST00000493455 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
HPS4-216ENST00000493455 B4DEV8 164 aa11.35□□□□□ -0.59
HPS4-216ENST00000493455 K7EN84 100 aa11.35□□□□□ -0.59
HPS4-216ENST00000493455 TYMSP04818 313 aa11.35□□□□□ -0.59
HPS4-216ENST00000493455 RPL19P84098 196 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms