RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 TFPI2P48307 235 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 PDZD11Q5EBL8 140 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 GDF5OSQ5U4N7 250 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 OR9G4Q8NGQ1 327 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 LINC01006Q8NI28 216 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 DUX3Q96PT4 197 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 TPPP3Q9BW30 176 aa6.89□□□□□ -1.31
SMARCC1-208ENST00000492896 TRBV7-9A0A0J9YWB2 115 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 GRIFINA4D1Z8 144 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 IFITM10A6NMD0 228 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 ORM1P02763 201 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 ARMS2P0C7Q2 107 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 ZNF688P0C7X2 276 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 FOSL1P15407 271 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 SRIP30626 198 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 CTRLP40313 264 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 DEFB1P60022 68 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 SNRPD3P62318 126 aaKnown RBP6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 PAFAH1B2P68402 229 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 SLAQ13239 276 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 KIAA1644Q3SXP7 199 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 FER1L6-AS1Q8NA97 138 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 DYNLRB2Q8TF09 96 aa6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 TSSC4Q9Y5U2 329 aaPredicted RBP6.88□□□□□ -1.31
SMARCC1-208ENST00000492896 HECTD1Q9ULT8 2610 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 TRAV2A0A0B4J234 112 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 TRAV21A0A0B4J279 112 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 A0A1W2PRX2 142 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 INAFM1C9JVW0 142 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 F6UB75 175 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 IGLC6P0CF74 106 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 SMIM6P0DI80 62 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 Q0VG73 95 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 FHL3Q13643 280 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 OR10J3Q5JRS4 329 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 PSMG4Q5JS54 123 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 PRR9Q5T870 116 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 LYZL1Q6UWQ5 148 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 ADAMTSL5Q6ZMM2 481 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 LINC00518Q8N0U6 118 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 ZFAND2AQ8N6M9 145 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 C11orf44Q8N8P7 122 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 DLX4Q92988 240 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 RAX2Q96IS3 184 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 FAM19A4Q96LR4 140 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 CITED2Q99967 270 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 SSBP4Q9BWG4 385 aaPredicted RBP6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 HIVEP2P31629 2446 aa6.87□□□□□ -1.31
SMARCC1-208ENST00000492896 A0A1B0GUS0 222 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 CCL24O00175 119 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 TCF21O43680 179 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 CSN3P07498 182 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 FABP4P15090 132 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 HIST2H2BDQ6DRA6 164 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 EBLN2Q6P2I7 272 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 BAGE3Q86Y29 109 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 APRG1Q8IVJ8 170 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 TMEM18Q96B42 140 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 ODF3Q96PU9 254 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 HIST1H2BLQ99880 126 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 RNF114Q9Y508 228 aa6.86□□□□□ -1.31
SMARCC1-208ENST00000492896 IGKV3D-20A0A0C4DH25 116 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 J3KRW8 73 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 DUSP14O95147 198 aaKnown RBP6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 AMBPP02760 352 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 GPX1P07203 203 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 LEPP41159 167 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 PROK1P58294 105 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 TMEM256Q8N2U0 113 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 OR10D4PQ8NGN7 298 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 PACRGQ96M98 296 aaPredicted RBP6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 C11orf21Q9P2W6 132 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 TP53TG3Q9ULZ0 132 aa6.85□□□□□ -1.31
SMARCC1-208ENST00000492896 LOC102724200A0A096LPH7 203 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 A0A0J9YX75 114 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 F2Z2F3 143 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 SERF1AO75920 110 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 ESDP10768 282 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 CD33P20138 364 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 FOXI2Q6ZQN5 318 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 ZNF493Q6ZR52 646 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 TMEM61Q8N0U2 210 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 C18orf32Q8TCD1 76 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 C12orf57Q99622 126 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 ALKBH7Q9BT30 221 aaPredicted RBP6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 CNFNQ9BYD5 112 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 NAGKQ9UJ70 344 aa6.84□□□□□ -1.31
SMARCC1-208ENST00000492896 KLLNB2CW77 178 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 RNASE4P34096 147 aaKnown RBP6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 LINC00310P59036 64 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 CACNG7P62955 275 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 TWIST1Q15672 202 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 IQCJQ1A5X6 159 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 DEFB114Q30KQ6 69 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 PRR31Q5SQ13 230 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 KCNS1Q96KK3 526 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 AGRNO00468 2067 aa6.83□□□□□ -1.32
SMARCC1-208ENST00000492896 TRAV25A0A0B4J276 109 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms