RNA–Protein interactions for RNA: ENST00000492858.6

GPNMB-214, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 721 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-214ENST00000492858 SPANXN5Q5MJ07 72 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 IBA57Q5T440 356 aaKnown RBP7.96□□□□□ -1.14
GPNMB-214ENST00000492858 PATE2Q6UY27 113 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 TCTE3Q8IZS6 198 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 LYRM2Q9NU23 88 aaPredicted RBP7.96□□□□□ -1.14
GPNMB-214ENST00000492858 OR5AC2Q9NZP5 309 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 TP53TG3Q9ULZ0 132 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 RNF24Q9Y225 148 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 PXMP4Q9Y6I8 212 aa7.96□□□□□ -1.14
GPNMB-214ENST00000492858 ORM1P02763 201 aa7.95□□□□□ -1.14
GPNMB-214ENST00000492858 SELENOTP62341 195 aa7.95□□□□□ -1.14
GPNMB-214ENST00000492858 CD300CQ08708 224 aa7.95□□□□□ -1.14
GPNMB-214ENST00000492858 VWC2Q2TAL6 325 aa7.95□□□□□ -1.14
GPNMB-214ENST00000492858 CIRBP-AS1Q8TBR5 109 aa7.95□□□□□ -1.14
GPNMB-214ENST00000492858 BLNKQ8WV28 456 aa7.95□□□□□ -1.14
GPNMB-214ENST00000492858 ARV1Q9H2C2 271 aa7.95□□□□□ -1.14
GPNMB-214ENST00000492858 KLLNB2CW77 178 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 SSSCA1O60232 199 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 MPDU1O75352 247 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 MT1HL1P0DM35 61 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
GPNMB-214ENST00000492858 ASIPP42127 132 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 ARL16Q0P5N6 197 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 LINC00305Q7Z4B0 112 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 BPIFA4PQ86YQ2 179 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 TMEM252Q8N6L7 170 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 ZNF479Q96JC4 524 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 GGACTQ9BVM4 153 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 TM2D2Q9BX73 214 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 DNAJC4Q9NNZ3 241 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 PSENENQ9NZ42 101 aa7.94□□□□□ -1.14
GPNMB-214ENST00000492858 STRAPQ9Y3F4 350 aaKnown RBP7.94□□□□□ -1.14
GPNMB-214ENST00000492858 LSM5Q9Y4Y9 91 aaKnown RBP7.94□□□□□ -1.14
GPNMB-214ENST00000492858 IGSF23A1L1A6 192 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 C9JCJ5 164 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 RGS13O14921 159 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 IGLV2-8P01709 118 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 PET100P0DJ07 73 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 PPT1P50897 306 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 HNRNPA3P51991 378 aaKnown RBP7.93□□□□□ -1.14
GPNMB-214ENST00000492858 RPL37AP61513 92 aaKnown RBP7.93□□□□□ -1.14
GPNMB-214ENST00000492858 ERCC8Q13216 396 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 IQCF2Q8IXL9 164 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 OR2T35Q8NGX2 323 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 SAT2Q96F10 170 aaPredicted RBP7.93□□□□□ -1.14
GPNMB-214ENST00000492858 AQP10Q96PS8 301 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 ARPC5LQ9BPX5 153 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 MBD2Q9UBB5 411 aa7.93□□□□□ -1.14
GPNMB-214ENST00000492858 LOC100131303A0A0U1RQF7 123 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 FAM24AA6NFZ4 105 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 HMSDA8MTL9 139 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 H3BQ15 152 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 CCNKO75909 580 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 SCGB1D2O95969 90 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 IGHV3-30P01768 117 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 IGHV3-33P01772 117 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 IGLC2P0DOY2 106 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 IGHV3-30-3P0DP02 117 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 IGHV3-30-5P0DP03 117 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 PVALBP20472 110 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-214ENST00000492858 SULT1A1P50225 295 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 BAXQ07812 192 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 ACOT6Q3I5F7 207 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-214ENST00000492858 MORN5Q5VZ52 161 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 NHLRC2Q8NBF2 726 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 OR11H4Q8NGC9 324 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 SLC25A31Q9H0C2 315 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 TNFSF18Q9UNG2 199 aa7.92□□□□□ -1.14
GPNMB-214ENST00000492858 IGHV1OR15-1A0A075B7D0 117 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 RNF222A6NCQ9 220 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 RBFOX3A6NFN3 312 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 GPX1P07203 203 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 TIRAPP58753 221 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 S100A10P60903 97 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 SLC38A11Q08AI6 406 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 TDRG1Q3Y452 100 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 Q6ZQT7 251 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 SH2D6Q7Z4S9 175 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 OR10P1Q8NGE3 313 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 OR10G4Q8NGN3 311 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 DAZAP1Q96EP5 407 aaKnown RBP7.91□□□□□ -1.14
GPNMB-214ENST00000492858 FAM19A4Q96LR4 140 aa7.91□□□□□ -1.14
GPNMB-214ENST00000492858 TRAV8-6A0A0B4J262 113 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 L7N2F9 121 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 M0R3E3 92 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 METTL15P1P0C7V9 234 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 S100A11P31949 105 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 VAMP2P63027 116 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 NHLH2Q02577 135 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 LAGE3Q14657 143 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 OPCMLQ14982 345 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 LRRC37A5PQ49AS3 106 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 OR10J3Q5JRS4 329 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 PXDC1Q5TGL8 231 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 C9orf47Q6ZRZ4 202 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 THAP6Q8TBB0 222 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 LINC00477Q96M19 166 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 HSPB11Q9Y547 144 aa7.9□□□□□ -1.14
GPNMB-214ENST00000492858 hCG_2014768A0A024R1R8 64 aa7.89□□□□□ -1.15
GPNMB-214ENST00000492858 COX7A2P2O60397 106 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms