RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 TRAV12-3A0A0B4J271 114 aa16.63■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 GTF3C1Q12789 2109 aa16.63■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 C2orf82Q6UX34 121 aa16.63■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 BOD1L2Q8IYS8 172 aa16.63■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 TEX48A0A1B0GUV7 120 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 E7EUB6 86 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 C8orf86Q6ZUL3 223 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 CACNA1HO95180 2353 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 IGKV3OR2-268A0A0C4DH90 116 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 ATP6V0E1O15342 81 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 OR13C6PQ8NH95 151 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 LINC01587Q99440 93 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 IGKV3D-20A0A0C4DH25 116 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 COL6A6A6NMZ7 2263 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 A0A087WWL8 130 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 MBD6Q96DN6 1003 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 TMEM141Q96I45 108 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 RITA1Q96K30 269 aa16.62■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 PMVKQ15126 192 aa16.61■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 DAZAP2Q15038 168 aaPredicted RBP16.61■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 IGLV2-23P01705 113 aa16.6■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 PRSS22Q9GZN4 317 aa16.6■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 FCN3O75636 299 aa16.6■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 HLA-DMBP28068 263 aa16.6■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 USMG5Q96IX5 58 aa16.6■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 MALRD1Q5VYJ5 2156 aa16.6■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 MED13Q9UHV7 2174 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 SPATA12Q7Z6I5 190 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 DYNAPQ8N1N2 210 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 K7EIM0 57 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 MED12LQ86YW9 2145 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 RHPN1-AS1Q9BWJ2 59 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 IGLL5B9A064 214 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 DKK4Q9UBT3 224 aa16.59■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 TRBV6-1A0A0K0K1D8 114 aa16.58■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 CGB3P0DN86 165 aa16.58■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 CGB7P0DN87 165 aa16.58■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 SAA4P35542 130 aa16.58■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 C20orf78Q9BR46 151 aa16.58■□□□□ 0.25
CHKB-CPT1B-203ENST00000492556 NOTCH3Q9UM47 2321 aa16.58■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 IGKV1D-37A0A075B6S9 117 aa16.58■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 SPRY4Q9C004 299 aa16.58■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 HIGD1BQ9P298 99 aa16.58■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 ZNF688P0C7X2 276 aa16.57■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 ITLN2Q8WWU7 325 aaPredicted RBP16.57■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 GATA1P15976 413 aaPredicted RBP16.57■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 C10orf142B7Z368 130 aa16.57■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 NPC2P61916 151 aa16.57■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 TIMM21Q9BVV7 248 aa16.57■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 TNRC6AQ8NDV7 1962 aaKnown RBP16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 TRBV7-9A0A0J9YWB2 115 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 PLA2G2CQ5R387 149 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 CRYGCP07315 174 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 FXYD2P54710 66 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 LINC00322Q6ZN03 302 aaPredicted RBP16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 CFHR4Q92496 578 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 MSMPQ1L6U9 139 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 PRSS33Q8NF86 280 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 TOMM7Q9P0U1 55 aa16.56■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 G3V318 75 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 FOXI2Q6ZQN5 318 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 AGPAT4-IT1Q9H0P7 198 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 RNF114Q9Y508 228 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 PCNX1Q96RV3 2341 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 RBAKDNA6NC62 111 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 MSRB1Q9NZV6 116 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 UBE2E1P51965 193 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 ANXA2RQ3ZCQ2 193 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 IGFL2Q6UWQ7 119 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 MORN3Q6PF18 240 aaPredicted RBP16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 MLST8Q9BVC4 326 aa16.55■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 G3V4G9 280 aa16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 RNASE1P07998 156 aaKnown RBP16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 SPXQ9BT56 116 aa16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 PRO1854Q9UHT4 67 aa16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 A0A0U1RRA0 63 aa16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 C1orf229Q6ZS94 237 aaPredicted RBP16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 NEGR1Q7Z3B1 354 aa16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 TRPT1Q86TN4 253 aaKnown RBP16.54■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 SH2D6Q7Z4S9 175 aa16.53■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 UTF1Q5T230 341 aa16.53■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 RBX1P62877 108 aa16.53■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 DAZ1Q9NQZ3 744 aaKnown RBP16.53■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 SDHAF1A6NFY7 115 aa16.52■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 LY6G5BQ8NDX9 201 aa16.52■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 NCKAP5O14513 1909 aa16.52■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 TEX22C9J3V5 150 aa16.52■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 K7EMI3 77 aa16.52■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 IGHV3-73A0A0B4J1V6 119 aa16.52■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 ZNF493Q6ZR52 646 aa16.52■□□□□ 0.24
CHKB-CPT1B-203ENST00000492556 PRSS29PA6NIE9 313 aa16.52■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 Q8N7P7 452 aa16.51■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 TTTY13Q9BZ97 58 aa16.51■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 H3BUX3 64 aa16.51■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 LINC00310P59036 64 aa16.51■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 BRD3OSQ6XYD6 125 aa16.51■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 LINC00574Q9H8X3 128 aa16.51■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 PEMTQ9UBM1 199 aa16.51■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 OVOL3O00110 214 aa16.5■□□□□ 0.23
CHKB-CPT1B-203ENST00000492556 TP73-AS1Q9UF72 201 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms