RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 C9orf170A2RU37 121 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 C9JCJ5 164 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 TSC22D2O75157 780 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 TAS2R30P59541 319 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 UBE2MP61081 183 aaKnown RBP9.15□□□□□ -0.94
GPNMB-213ENST00000492512 RAB31Q13636 194 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 TMEM78Q5T7P6 136 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 PRR9Q5T870 116 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 Q6ZQT7 251 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 OR10G4Q8NGN3 311 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 OR1L4Q8NGR5 311 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 PFDN5Q99471 154 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 MARVELD1Q9BSK0 173 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 TIMM9Q9Y5J7 89 aa9.15□□□□□ -0.94
GPNMB-213ENST00000492512 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
GPNMB-213ENST00000492512 HIST1H1EP10412 219 aaKnown RBP9.14□□□□□ -0.95
GPNMB-213ENST00000492512 MIC13Q5XKP0 118 aa9.14□□□□□ -0.95
GPNMB-213ENST00000492512 Q6ZSA8 131 aa9.14□□□□□ -0.95
GPNMB-213ENST00000492512 C12orf45Q8N5I9 185 aaPredicted RBP9.14□□□□□ -0.95
GPNMB-213ENST00000492512 ZFAND2AQ8N6M9 145 aa9.14□□□□□ -0.95
GPNMB-213ENST00000492512 IGKV2-40A0A087WW87 121 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-213ENST00000492512 INMT-MINDY4F8WBC2 141 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 NDUFB4O95168 129 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 OXTP01178 125 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 IGKV2D-40P01614 121 aaPredicted RBP9.13□□□□□ -0.95
GPNMB-213ENST00000492512 PPT1P50897 306 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 LINC01556Q5JQF7 62 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 SH2D6Q7Z4S9 175 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 EXOC3-AS1Q8N2X6 119 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 NHLRC2Q8NBF2 726 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 BLNKQ8WV28 456 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 SLC25A31Q9H0C2 315 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 AAMDCQ9H7C9 122 aa9.13□□□□□ -0.95
GPNMB-213ENST00000492512 PDE6HQ13956 83 aa9.12□□□□□ -0.95
GPNMB-213ENST00000492512 IAH1Q2TAA2 248 aaPredicted RBP9.12□□□□□ -0.95
GPNMB-213ENST00000492512 MUC21Q5SSG8 566 aa9.12□□□□□ -0.95
GPNMB-213ENST00000492512 RASL10AQ92737 203 aa9.12□□□□□ -0.95
GPNMB-213ENST00000492512 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
GPNMB-213ENST00000492512 TRAV8-6A0A0B4J262 113 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 LOC100131303A0A0U1RQF7 123 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 C7orf66A4D0T2 115 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 TCRBP04435 133 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 BTCP35070 178 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 TIRAPP58753 221 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 FAM122CQ6P4D5 195 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 SPXQ9BT56 116 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 TMEM14CQ9P0S9 112 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 ZNF492Q9P255 531 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 BOLA1Q9Y3E2 137 aa9.11□□□□□ -0.95
GPNMB-213ENST00000492512 TRAV4A0A0B4J268 109 aa9.1□□□□□ -0.95
GPNMB-213ENST00000492512 PYYP10082 97 aa9.1□□□□□ -0.95
GPNMB-213ENST00000492512 OR10J3Q5JRS4 329 aa9.1□□□□□ -0.95
GPNMB-213ENST00000492512 OR4C5Q8NGB2 326 aa9.1□□□□□ -0.95
GPNMB-213ENST00000492512 TM2D2Q9BX73 214 aa9.1□□□□□ -0.95
GPNMB-213ENST00000492512 SLC39A9Q9NUM3 307 aa9.1□□□□□ -0.95
GPNMB-213ENST00000492512 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
GPNMB-213ENST00000492512 FAT3Q8TDW7 4589 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 L7N2F9 121 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 IGHV3-30P01768 117 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 IGHV3-33P01772 117 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-213ENST00000492512 H2AFB2P0C5Z0 115 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 IGHV3-30-3P0DP02 117 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 IGHV3-30-5P0DP03 117 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 RPL29P47914 159 aaKnown RBP9.09□□□□□ -0.95
GPNMB-213ENST00000492512 ZNF138P52744 262 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 VAMP2P63027 116 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 WFDC2Q14508 124 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 TMEM183BQ1AE95 376 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 SCXQ7RTU7 201 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 TMEM183AQ8IXX5 376 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 Q8TAT8 98 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 C20orf85Q9H1P6 137 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 GPN1Q9HCN4 374 aaPredicted RBP9.09□□□□□ -0.95
GPNMB-213ENST00000492512 NUDT15Q9NV35 164 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 UQCC1Q9NVA1 299 aa9.09□□□□□ -0.95
GPNMB-213ENST00000492512 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
GPNMB-213ENST00000492512 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
GPNMB-213ENST00000492512 TRBV7-9A0A0J9YWB2 115 aa9.08□□□□□ -0.96
GPNMB-213ENST00000492512 CST7O76096 145 aa9.08□□□□□ -0.96
GPNMB-213ENST00000492512 BAXQ07812 192 aa9.08□□□□□ -0.96
GPNMB-213ENST00000492512 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
GPNMB-213ENST00000492512 WDR83OSQ9Y284 106 aa9.08□□□□□ -0.96
GPNMB-213ENST00000492512 LECT2O14960 151 aa9.07□□□□□ -0.96
GPNMB-213ENST00000492512 PFN1P07737 140 aaKnown RBP9.07□□□□□ -0.96
GPNMB-213ENST00000492512 CAV2P51636 162 aa9.07□□□□□ -0.96
GPNMB-213ENST00000492512 ZNF266Q14584 549 aa9.07□□□□□ -0.96
GPNMB-213ENST00000492512 LAGE3Q14657 143 aa9.07□□□□□ -0.96
GPNMB-213ENST00000492512 TDRG1Q3Y452 100 aa9.07□□□□□ -0.96
GPNMB-213ENST00000492512 TCTE3Q8IZS6 198 aa9.07□□□□□ -0.96
GPNMB-213ENST00000492512 FLVCR2Q9UPI3 526 aa9.07□□□□□ -0.96
GPNMB-213ENST00000492512 TRAV6A0A075B6T7 132 aa9.06□□□□□ -0.96
GPNMB-213ENST00000492512 IGHV3-16A0A0C4DH30 117 aa9.06□□□□□ -0.96
GPNMB-213ENST00000492512 UBE2L5PA0A1B0GUS4 154 aa9.06□□□□□ -0.96
GPNMB-213ENST00000492512 NDUFB6O95139 128 aa9.06□□□□□ -0.96
GPNMB-213ENST00000492512 KRTAP10-4P60372 401 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-213ENST00000492512 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
GPNMB-213ENST00000492512 MED28Q9H204 178 aa9.06□□□□□ -0.96
GPNMB-213ENST00000492512 LSM5Q9Y4Y9 91 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms