RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 SSX7Q7RTT5 188 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 EIF4E3Q8N5X7 224 aaKnown RBP5.76□□□□□ -1.49
LSM2-213ENST00000491421 RXFP4Q8TDU9 374 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 FXYD5Q96DB9 178 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 ZNF503Q96F45 646 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 PHYHIPLQ96FC7 376 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 LINC00467Q9BRT7 94 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 TMPRSS5Q9H3S3 457 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 HSPB11Q9Y547 144 aa5.76□□□□□ -1.49
LSM2-213ENST00000491421 DNAH11Q96DT5 4516 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 TRGV1A0A0A0MS02 117 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 RPL12P30050 165 aaKnown RBP5.75□□□□□ -1.49
LSM2-213ENST00000491421 CSN1S1P47710 185 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 ZNF138P52744 262 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 RANP62826 216 aaKnown RBP5.75□□□□□ -1.49
LSM2-213ENST00000491421 KHDC3LQ587J8 217 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 PRR9Q5T870 116 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 C6orf223Q8N319 242 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 ZFAND2AQ8N6M9 145 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 C11orf72Q8NBR9 251 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 Q8TAT8 98 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 SCGB1C1Q8TD33 95 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 SMIM3Q9BZL3 60 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 ZNF492Q9P255 531 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 PKD1P98161 4303 aa5.75□□□□□ -1.49
LSM2-213ENST00000491421 DYNC1H1Q14204 4646 aaKnown RBP5.74□□□□□ -1.49
LSM2-213ENST00000491421 IGHV1OR15-1A0A075B7D0 117 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 H3BNG1 76 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 MED14OSP0DP75 135 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 TCL1AP56279 114 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 TAS2R45P59539 299 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 IBA57Q5T440 356 aaKnown RBP5.74□□□□□ -1.49
LSM2-213ENST00000491421 LYPD1Q8N2G4 141 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 C18orf15Q96N68 181 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 Q9H3A6 140 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 MBD2Q9UBB5 411 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 TP53TG3Q9ULZ0 132 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 KLF12Q9Y4X4 402 aa5.74□□□□□ -1.49
LSM2-213ENST00000491421 TRBV7-9A0A0J9YWB2 115 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 RBAKDNA6NC62 111 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 SPINK4O60575 86 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 TNP2Q05952 138 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 TTC32Q5I0X7 151 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 CST9LP1Q5W188 147 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 Q6ZQT7 251 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 RAB24Q969Q5 203 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 Q9H8V8 135 aa5.73□□□□□ -1.49
LSM2-213ENST00000491421 RYR1P21817 5038 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 A0A1W2PPV4 95 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 DIRC3C9JPN6 131 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 EIF3GO75821 320 aaKnown RBP eCLIP5.72□□□□□ -1.49
LSM2-213ENST00000491421 IGHV3-53P01767 116 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 S100A6P06703 90 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 MALP21145 153 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 ZNF415Q09FC8 603 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 ZNF266Q14584 549 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 ESRGQ1W209 222 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 ACOT6Q3I5F7 207 aaPredicted RBP5.72□□□□□ -1.49
LSM2-213ENST00000491421 FAM74A1Q5RGS3 127 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 MUC21Q5SSG8 566 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 ZNF575Q86XF7 245 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 CMTM2Q8TAZ6 248 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 VSIG2Q96IQ7 327 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 ST6GAL2Q96JF0 529 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 HYLS1Q96M11 299 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 UPK3BQ9BT76 320 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 WFDC1Q9HC57 220 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 BATF3Q9NR55 127 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 OTORQ9NRC9 128 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 MRPL16Q9NX20 251 aaKnown RBP5.72□□□□□ -1.49
LSM2-213ENST00000491421 RPH3ALQ9UNE2 315 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 MRPS16Q9Y3D3 137 aaKnown RBP5.72□□□□□ -1.49
LSM2-213ENST00000491421 ALG5Q9Y673 324 aa5.72□□□□□ -1.49
LSM2-213ENST00000491421 NACAE9PAV3 2078 aa5.71□□□□□ -1.49
LSM2-213ENST00000491421 A0A096LPF7 62 aa5.71□□□□□ -1.5
LSM2-213ENST00000491421 PAX4O43316 350 aa5.71□□□□□ -1.5
LSM2-213ENST00000491421 RAB2AP61019 212 aa5.71□□□□□ -1.5
LSM2-213ENST00000491421 PQLC2Q6ZP29 291 aa5.71□□□□□ -1.5
LSM2-213ENST00000491421 KRTAP1-5Q9BYS1 174 aa5.71□□□□□ -1.5
LSM2-213ENST00000491421 LENEPQ9Y5L5 61 aa5.71□□□□□ -1.5
LSM2-213ENST00000491421 TRGV11A0A075B6L2 103 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 A0A1W2PPQ1 181 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 XKRY2A2RUG3 117 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 PGPA6NDG6 321 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 C16orf90A8MZG2 172 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 SLAQ13239 276 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 TMEM183BQ1AE95 376 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 Q6AWC8 147 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 FAM159AQ6UWV7 190 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 GOLT1AQ6ZVE7 132 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 TMEM183AQ8IXX5 376 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 LINC00469Q8N7U9 141 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 OR10G4Q8NGN3 311 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 OR10G9Q8NGN4 311 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 OR10G7Q8NGN6 311 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 TMED6Q8WW62 240 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 MDFICQ9P1T7 246 aa5.7□□□□□ -1.5
LSM2-213ENST00000491421 PRO0255Q9UI72 69 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms