RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 BTF3P20290 206 aaKnown RBP10.77□□□□□ -0.69
SMPD4-220ENST00000491319 H2BFSP57053 126 aa10.77□□□□□ -0.69
SMPD4-220ENST00000491319 RANP62826 216 aaKnown RBP10.77□□□□□ -0.69
SMPD4-220ENST00000491319 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.69
SMPD4-220ENST00000491319 IFITM3Q01628 133 aa10.77□□□□□ -0.69
SMPD4-220ENST00000491319 ZNF415Q09FC8 603 aa10.77□□□□□ -0.69
SMPD4-220ENST00000491319 MUC21Q5SSG8 566 aa10.77□□□□□ -0.69
SMPD4-220ENST00000491319 PPP1R1CQ8WVI7 109 aa10.77□□□□□ -0.69
SMPD4-220ENST00000491319 ATP5SQ99766 215 aa10.77□□□□□ -0.69
SMPD4-220ENST00000491319 TRBV7-9A0A0J9YWB2 115 aa10.76□□□□□ -0.69
SMPD4-220ENST00000491319 PRAF2O60831 178 aa10.76□□□□□ -0.69
SMPD4-220ENST00000491319 NXPH4O95158 308 aa10.76□□□□□ -0.69
SMPD4-220ENST00000491319 CYCSP99999 105 aaKnown RBP10.76□□□□□ -0.69
SMPD4-220ENST00000491319 FFAR4Q5NUL3 377 aa10.76□□□□□ -0.69
SMPD4-220ENST00000491319 Q6ZRN7 208 aaPredicted RBP10.76□□□□□ -0.69
SMPD4-220ENST00000491319 C8orf49Q96NF6 230 aa10.76□□□□□ -0.69
SMPD4-220ENST00000491319 PRO0255Q9UI72 69 aa10.76□□□□□ -0.69
SMPD4-220ENST00000491319 RBAKDNA6NC62 111 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 INMT-MINDY4F8WBC2 141 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 EIF3GO75821 320 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMPD4-220ENST00000491319 CSN1S1P47710 185 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 CRYBA4P53673 196 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 FHL2Q14192 279 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 ZNF266Q14584 549 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 HSPB11Q9Y547 144 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 DNAH5Q8TE73 4624 aa10.75□□□□□ -0.69
SMPD4-220ENST00000491319 KHDC3LQ587J8 217 aa10.74□□□□□ -0.69
SMPD4-220ENST00000491319 LYPD1Q8N2G4 141 aa10.74□□□□□ -0.69
SMPD4-220ENST00000491319 SMIM3Q9BZL3 60 aa10.74□□□□□ -0.69
SMPD4-220ENST00000491319 MDFICQ9P1T7 246 aa10.74□□□□□ -0.69
SMPD4-220ENST00000491319 HHLA3Q9XRX5 114 aa10.74□□□□□ -0.69
SMPD4-220ENST00000491319 DIRC3C9JPN6 131 aa10.73□□□□□ -0.69
SMPD4-220ENST00000491319 MPC2O95563 127 aa10.73□□□□□ -0.69
SMPD4-220ENST00000491319 SFTA3P0C7M3 94 aa10.73□□□□□ -0.69
SMPD4-220ENST00000491319 TMEM183BQ1AE95 376 aa10.73□□□□□ -0.69
SMPD4-220ENST00000491319 Q6AWC8 147 aa10.73□□□□□ -0.69
SMPD4-220ENST00000491319 TMEM183AQ8IXX5 376 aa10.73□□□□□ -0.69
SMPD4-220ENST00000491319 Q8N1X5 172 aa10.73□□□□□ -0.69
SMPD4-220ENST00000491319 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 SLAQ13239 276 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 MRPL23Q16540 153 aaKnown RBP10.72□□□□□ -0.69
SMPD4-220ENST00000491319 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 ZNF479Q96JC4 524 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 HYLS1Q96M11 299 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 MARVELD1Q9BSK0 173 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 RPH3ALQ9UNE2 315 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 TNFRSF18Q9Y5U5 241 aa10.72□□□□□ -0.69
SMPD4-220ENST00000491319 SSNA1O43805 119 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 PET100P0DJ07 73 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 FUSP35637 526 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMPD4-220ENST00000491319 TAS2R45P59539 299 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 FAM159AQ6UWV7 190 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 NEGR1Q7Z3B1 354 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 SCGB1C1Q8TD33 95 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 MBD2Q9UBB5 411 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 NAGKQ9UJ70 344 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 LENEPQ9Y5L5 61 aa10.71□□□□□ -0.69
SMPD4-220ENST00000491319 TRGV11A0A075B6L2 103 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 K7EQD1 137 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 IFNA5P01569 189 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 RPL12P30050 165 aaKnown RBP10.7□□□□□ -0.7
SMPD4-220ENST00000491319 SRIP30626 198 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 OR10G4Q8NGN3 311 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 WFDC1Q9HC57 220 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 SCRT2Q9NQ03 307 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 OTORQ9NRC9 128 aa10.7□□□□□ -0.7
SMPD4-220ENST00000491319 WFDC10BQ8IUB3 73 aa10.69□□□□□ -0.7
SMPD4-220ENST00000491319 TMED6Q8WW62 240 aa10.69□□□□□ -0.7
SMPD4-220ENST00000491319 RASL10AQ92737 203 aa10.69□□□□□ -0.7
SMPD4-220ENST00000491319 SPXQ9BT56 116 aa10.69□□□□□ -0.7
SMPD4-220ENST00000491319 PTTG2Q9NZH5 202 aa10.69□□□□□ -0.7
SMPD4-220ENST00000491319 PGPA6NDG6 321 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 F6UZH7 168 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 DNAH10OSP0CZ25 163 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 GYPEP15421 78 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 ERVFC1-1P60608 527 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 RAB2AP61019 212 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 TDRG1Q3Y452 100 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 GOLT1AQ6ZVE7 132 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 IQCF2Q8IXL9 164 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 CMTM2Q8TAZ6 248 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 PCNPQ8WW12 178 aaKnown RBP10.68□□□□□ -0.7
SMPD4-220ENST00000491319 LY96Q9Y6Y9 160 aa10.68□□□□□ -0.7
SMPD4-220ENST00000491319 TRAV8-1A0A0A6YYK1 113 aa10.67□□□□□ -0.7
SMPD4-220ENST00000491319 HMGB3O15347 200 aaKnown RBP10.67□□□□□ -0.7
SMPD4-220ENST00000491319 TVP23CQ96ET8 276 aa10.67□□□□□ -0.7
SMPD4-220ENST00000491319 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 IGHV3-16A0A0C4DH30 117 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 A6NHS1 94 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 GNRH2O43555 120 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 TYMSP04818 313 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 GNG5P63218 68 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 ACOT6Q3I5F7 207 aaPredicted RBP10.66□□□□□ -0.7
SMPD4-220ENST00000491319 FAM74A1Q5RGS3 127 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 PQLC2Q6ZP29 291 aa10.66□□□□□ -0.7
SMPD4-220ENST00000491319 LOC100131303A0A0U1RQF7 123 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 A0A1W2PPV4 95 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 M0R2P5 195 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 EREGO14944 169 aa10.65□□□□□ -0.7
SMPD4-220ENST00000491319 ORM1P02763 201 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms