RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 IFITM3Q01628 133 aa9.38□□□□□ -0.91
COL6A3-211ENST00000491233 ZNF415Q09FC8 603 aa9.38□□□□□ -0.91
COL6A3-211ENST00000491233 ATP5SQ99766 215 aa9.38□□□□□ -0.91
COL6A3-211ENST00000491233 ICOSQ9Y6W8 199 aa9.38□□□□□ -0.91
COL6A3-211ENST00000491233 TRBV7-9A0A0J9YWB2 115 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 PAX4O43316 350 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 CSN1S1P47710 185 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 H2BFSP57053 126 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 LINC00315P59091 139 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
COL6A3-211ENST00000491233 CYCSP99999 105 aaKnown RBP9.37□□□□□ -0.91
COL6A3-211ENST00000491233 FFAR4Q5NUL3 377 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 MUC21Q5SSG8 566 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 MAPKAPK5-AS1Q8N8E1 139 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 PPP1R1CQ8WVI7 109 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 HSPB11Q9Y547 144 aa9.37□□□□□ -0.91
COL6A3-211ENST00000491233 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 SIVA1O15304 175 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 NXPH4O95158 308 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 BTF3P20290 206 aaKnown RBP9.36□□□□□ -0.91
COL6A3-211ENST00000491233 KRTAP10-2P60368 255 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 ZNF266Q14584 549 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 KHDC3LQ587J8 217 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 SMIM3Q9BZL3 60 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 PRO0255Q9UI72 69 aa9.36□□□□□ -0.91
COL6A3-211ENST00000491233 APOBP04114 4563 aaKnown RBP9.36□□□□□ -0.91
COL6A3-211ENST00000491233 EIF3GO75821 320 aaKnown RBP eCLIP9.35□□□□□ -0.91
COL6A3-211ENST00000491233 MPC2O95563 127 aa9.35□□□□□ -0.91
COL6A3-211ENST00000491233 CRYBA4P53673 196 aa9.35□□□□□ -0.91
COL6A3-211ENST00000491233 LYPD1Q8N2G4 141 aa9.35□□□□□ -0.91
COL6A3-211ENST00000491233 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 SSNA1O43805 119 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 IFNA5P01569 189 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 PET100P0DJ07 73 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 TAS2R45P59539 299 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 FHL2Q14192 279 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 Q6ZRN7 208 aaPredicted RBP9.34□□□□□ -0.91
COL6A3-211ENST00000491233 SCGB1C1Q8TD33 95 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 MARVELD1Q9BSK0 173 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 MBD2Q9UBB5 411 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 RPH3ALQ9UNE2 315 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 HHLA3Q9XRX5 114 aa9.34□□□□□ -0.91
COL6A3-211ENST00000491233 TRGV4A0A0C4DH28 118 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 SFTA3P0C7M3 94 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 RPL12P30050 165 aaKnown RBP9.33□□□□□ -0.92
COL6A3-211ENST00000491233 SLAQ13239 276 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 TMEM183BQ1AE95 376 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 Q6AWC8 147 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 PTTG2Q9NZH5 202 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 MDFICQ9P1T7 246 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 NAGKQ9UJ70 344 aa9.33□□□□□ -0.92
COL6A3-211ENST00000491233 DNAH5Q8TE73 4624 aa9.32□□□□□ -0.92
COL6A3-211ENST00000491233 TRGV11A0A075B6L2 103 aa9.32□□□□□ -0.92
COL6A3-211ENST00000491233 MRPL23Q16540 153 aaKnown RBP9.32□□□□□ -0.92
COL6A3-211ENST00000491233 FAM159AQ6UWV7 190 aa9.32□□□□□ -0.92
COL6A3-211ENST00000491233 HYLS1Q96M11 299 aa9.32□□□□□ -0.92
COL6A3-211ENST00000491233 OTORQ9NRC9 128 aa9.32□□□□□ -0.92
COL6A3-211ENST00000491233 LENEPQ9Y5L5 61 aa9.32□□□□□ -0.92
COL6A3-211ENST00000491233 LYPD5Q6UWN5 251 aa9.31□□□□□ -0.92
COL6A3-211ENST00000491233 NEGR1Q7Z3B1 354 aa9.31□□□□□ -0.92
COL6A3-211ENST00000491233 OR10G4Q8NGN3 311 aa9.31□□□□□ -0.92
COL6A3-211ENST00000491233 CMTM2Q8TAZ6 248 aa9.31□□□□□ -0.92
COL6A3-211ENST00000491233 PCNPQ8WW12 178 aaKnown RBP9.31□□□□□ -0.92
COL6A3-211ENST00000491233 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
COL6A3-211ENST00000491233 ZNF479Q96JC4 524 aa9.31□□□□□ -0.92
COL6A3-211ENST00000491233 WFDC1Q9HC57 220 aa9.31□□□□□ -0.92
COL6A3-211ENST00000491233 PGPA6NDG6 321 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 A6NHS1 94 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 GYPEP15421 78 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 SRIP30626 198 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 DEFA1P59665 94 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 DEFA3P59666 94 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 RAB2AP61019 212 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 ACOT6Q3I5F7 207 aaPredicted RBP9.3□□□□□ -0.92
COL6A3-211ENST00000491233 GOLT1AQ6ZVE7 132 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 Q8N1X5 172 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 RASL10AQ92737 203 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 SPXQ9BT56 116 aa9.3□□□□□ -0.92
COL6A3-211ENST00000491233 A0A1W2PPV4 95 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 F6UZH7 168 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 K7EQD1 137 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 ERVFC1-1P60608 527 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 FAM74A1Q5RGS3 127 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 PQLC2Q6ZP29 291 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 WFDC10BQ8IUB3 73 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 IQCF2Q8IXL9 164 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 TNFRSF18Q9Y5U5 241 aa9.29□□□□□ -0.92
COL6A3-211ENST00000491233 TRAV8-1A0A0A6YYK1 113 aa9.28□□□□□ -0.92
COL6A3-211ENST00000491233 TRAV4A0A0B4J268 109 aa9.28□□□□□ -0.92
COL6A3-211ENST00000491233 IGHV3-16A0A0C4DH30 117 aa9.28□□□□□ -0.92
COL6A3-211ENST00000491233 HMGB3O15347 200 aaKnown RBP9.28□□□□□ -0.92
COL6A3-211ENST00000491233 FUSP35637 526 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL6A3-211ENST00000491233 GNG5P63218 68 aa9.28□□□□□ -0.92
COL6A3-211ENST00000491233 TDRG1Q3Y452 100 aa9.28□□□□□ -0.92
COL6A3-211ENST00000491233 SCRT2Q9NQ03 307 aa9.28□□□□□ -0.92
COL6A3-211ENST00000491233 LY96Q9Y6Y9 160 aa9.28□□□□□ -0.92
COL6A3-211ENST00000491233 TRAV21A0A0B4J279 112 aa9.27□□□□□ -0.93
COL6A3-211ENST00000491233 M0R2P5 195 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms