RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PHYHIPLQ96FC7 376 aa13.58□□□□□ -0.24
SREBF1-216ENST00000490796 KRTAP4-5Q9BYR2 181 aa13.58□□□□□ -0.24
SREBF1-216ENST00000490796 TRBV7-9A0A0J9YWB2 115 aa13.57□□□□□ -0.24
SREBF1-216ENST00000490796 UBE2L3P68036 154 aaKnown RBP13.57□□□□□ -0.24
SREBF1-216ENST00000490796 INMT-MINDY4F8WBC2 141 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 NXPH4O95158 308 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 IFNA5P01569 189 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 LINC00315P59091 139 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 MRPL23Q16540 153 aaKnown RBP13.56□□□□□ -0.24
SREBF1-216ENST00000490796 FFAR4Q5NUL3 377 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 MUC21Q5SSG8 566 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 LYPD1Q8N2G4 141 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 SCGB1C1Q8TD33 95 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 C8orf49Q96NF6 230 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 ATP5SQ99766 215 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 HHLA3Q9XRX5 114 aa13.56□□□□□ -0.24
SREBF1-216ENST00000490796 TRGV4A0A0C4DH28 118 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 RBAKDNA6NC62 111 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 H0YIZ8 118 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 EREGO14944 169 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 UPK1BO75841 260 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 PET100P0DJ07 73 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 TAS2R45P59539 299 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 Q6ZQT7 251 aa13.55□□□□□ -0.24
SREBF1-216ENST00000490796 SSNA1O43805 119 aa13.54□□□□□ -0.24
SREBF1-216ENST00000490796 CRYBA4P53673 196 aa13.54□□□□□ -0.24
SREBF1-216ENST00000490796 ZNF266Q14584 549 aa13.54□□□□□ -0.24
SREBF1-216ENST00000490796 KHDC3LQ587J8 217 aa13.54□□□□□ -0.24
SREBF1-216ENST00000490796 FAM159AQ6UWV7 190 aa13.54□□□□□ -0.24
SREBF1-216ENST00000490796 PPP1R1CQ8WVI7 109 aa13.54□□□□□ -0.24
SREBF1-216ENST00000490796 PCNPQ8WW12 178 aaKnown RBP13.54□□□□□ -0.24
SREBF1-216ENST00000490796 KRTAP10-2P60368 255 aa13.53□□□□□ -0.24
SREBF1-216ENST00000490796 CMTM2Q8TAZ6 248 aa13.53□□□□□ -0.24
SREBF1-216ENST00000490796 HYLS1Q96M11 299 aa13.53□□□□□ -0.24
SREBF1-216ENST00000490796 TRGV11A0A075B6L2 103 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 TRAV9-2A0A087WT02 112 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 FHL2Q14192 279 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 FAM74A1Q5RGS3 127 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 NEGR1Q7Z3B1 354 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 SPXQ9BT56 116 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 PTTG2Q9NZH5 202 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 HSPB11Q9Y547 144 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 LENEPQ9Y5L5 61 aa13.52□□□□□ -0.25
SREBF1-216ENST00000490796 SRIP30626 198 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 TMEM183BQ1AE95 376 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 LYPD5Q6UWN5 251 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 NFE4Q86UQ8 179 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 TMEM183AQ8IXX5 376 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 SMIM3Q9BZL3 60 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 SCRT2Q9NQ03 307 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 NAGKQ9UJ70 344 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 RPH3ALQ9UNE2 315 aa13.51□□□□□ -0.25
SREBF1-216ENST00000490796 DNAH5Q8TE73 4624 aa13.5□□□□□ -0.25
SREBF1-216ENST00000490796 DIRC3C9JPN6 131 aa13.5□□□□□ -0.25
SREBF1-216ENST00000490796 ERVFC1-1P60608 527 aa13.5□□□□□ -0.25
SREBF1-216ENST00000490796 Q8N1X5 172 aa13.5□□□□□ -0.25
SREBF1-216ENST00000490796 A0A1W2PPV4 95 aa13.49□□□□□ -0.25
SREBF1-216ENST00000490796 MPC2O95563 127 aa13.49□□□□□ -0.25
SREBF1-216ENST00000490796 RPL12P30050 165 aaKnown RBP13.49□□□□□ -0.25
SREBF1-216ENST00000490796 H2BFSP57053 126 aa13.49□□□□□ -0.25
SREBF1-216ENST00000490796 Q6AWC8 147 aa13.49□□□□□ -0.25
SREBF1-216ENST00000490796 OTORQ9NRC9 128 aa13.49□□□□□ -0.25
SREBF1-216ENST00000490796 LY96Q9Y6Y9 160 aa13.49□□□□□ -0.25
SREBF1-216ENST00000490796 PGPA6NDG6 321 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 ORM1P02763 201 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 SFTA3P0C7M3 94 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 DEFA1P59665 94 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 DEFA3P59666 94 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 ACOT6Q3I5F7 207 aaPredicted RBP13.48□□□□□ -0.25
SREBF1-216ENST00000490796 OR10G4Q8NGN3 311 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 TMED6Q8WW62 240 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 ZNF479Q96JC4 524 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 PGPEP1Q9NXJ5 209 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 MBD2Q9UBB5 411 aa13.48□□□□□ -0.25
SREBF1-216ENST00000490796 APOBP04114 4563 aaKnown RBP13.48□□□□□ -0.25
SREBF1-216ENST00000490796 GYPEP15421 78 aa13.47□□□□□ -0.25
SREBF1-216ENST00000490796 IQCF2Q8IXL9 164 aa13.47□□□□□ -0.25
SREBF1-216ENST00000490796 RASL10AQ92737 203 aa13.47□□□□□ -0.25
SREBF1-216ENST00000490796 TXNDC17Q9BRA2 123 aa13.47□□□□□ -0.25
SREBF1-216ENST00000490796 MARVELD1Q9BSK0 173 aa13.47□□□□□ -0.25
SREBF1-216ENST00000490796 K7EQD1 137 aa13.46□□□□□ -0.25
SREBF1-216ENST00000490796 EVI2AP22794 236 aa13.46□□□□□ -0.25
SREBF1-216ENST00000490796 Q6ZRN7 208 aaPredicted RBP13.46□□□□□ -0.25
SREBF1-216ENST00000490796 OR4C5Q8NGB2 326 aa13.46□□□□□ -0.25
SREBF1-216ENST00000490796 TRAV21A0A0B4J279 112 aa13.45□□□□□ -0.26
SREBF1-216ENST00000490796 C9JCJ5 164 aa13.45□□□□□ -0.26
SREBF1-216ENST00000490796 EIF3GO75821 320 aaKnown RBP eCLIP13.45□□□□□ -0.26
SREBF1-216ENST00000490796 IFITM3Q01628 133 aa13.45□□□□□ -0.26
SREBF1-216ENST00000490796 PQLC2Q6ZP29 291 aa13.45□□□□□ -0.26
SREBF1-216ENST00000490796 GOLT1AQ6ZVE7 132 aa13.45□□□□□ -0.26
SREBF1-216ENST00000490796 TRAV4A0A0B4J268 109 aa13.44□□□□□ -0.26
SREBF1-216ENST00000490796 M0R2P5 195 aa13.44□□□□□ -0.26
SREBF1-216ENST00000490796 TNFRSF18Q9Y5U5 241 aa13.44□□□□□ -0.26
SREBF1-216ENST00000490796 K7EP13 123 aa13.43□□□□□ -0.26
SREBF1-216ENST00000490796 TDRG1Q3Y452 100 aa13.43□□□□□ -0.26
SREBF1-216ENST00000490796 CDPF1Q6NVV7 123 aa13.43□□□□□ -0.26
SREBF1-216ENST00000490796 KCNS1Q96KK3 526 aa13.43□□□□□ -0.26
SREBF1-216ENST00000490796 NDFIP1Q9BT67 221 aa13.43□□□□□ -0.26
SREBF1-216ENST00000490796 SDF2L1Q9HCN8 221 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms