RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 CPDO75976 1380 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 LAMB2P55268 1798 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 ZFC3H1O60293 1989 aaKnown RBP0.96□□□□□ -2.26
NF1-213ENST00000489712 TANC2Q9HCD6 1990 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 FREM1Q5H8C1 2179 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 ZNF727A8MUV8 499 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 INE1O15225 51 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 HCRTO43612 131 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 IGLC6P0CF74 106 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 PLGLB1Q02325 96 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 GDF5OSQ5U4N7 250 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 IDO2Q6ZQW0 420 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 LINC00299Q6ZSB3 139 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 ATOH7Q8N100 152 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 OR10AC1Q8NH08 325 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 LINC00526Q96FQ7 95 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 SAR1AQ9NR31 198 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 COL1A1P02452 1464 aaPredicted RBP0.96□□□□□ -2.26
NF1-213ENST00000489712 CR1P17927 2039 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 ALPK2Q86TB3 2170 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 KDM5CP41229 1560 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 VWDEQ8N2E2 1590 aa0.96□□□□□ -2.26
NF1-213ENST00000489712 COL24A1Q17RW2 1714 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 MYOFQ9NZM1 2061 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 ERCC6Q03468 1493 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 LOC110117498A0A087WWA1 95 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 A0A1W2PPB8 328 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 A0A1W2PRS3 328 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 KIR3DP1A8MWS1 328 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 FAM25AB3EWG3 89 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 FAM25CB3EWG5 89 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 FAM25GB3EWG6 89 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 JMJD7-PLA2G4BH0Y9G9 81 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 M0R2N4 97 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 CCL25O15444 150 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 NDUFA2O43678 99 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 PPYP01298 95 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 IGHV3-33P01772 117 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 CD14P08571 375 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 TSPAN19P0C672 248 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 GUCA1AP43080 201 aaPredicted RBP0.95□□□□□ -2.26
NF1-213ENST00000489712 RPS25P62851 125 aaKnown RBP0.95□□□□□ -2.26
NF1-213ENST00000489712 CLLU1Q5K131 121 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 GLYATL3Q5SZD4 288 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 KRTAP26-1Q6PEX3 210 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 IZUMO2Q6UXV1 221 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 LINC00322Q6ZN03 302 aaPredicted RBP0.95□□□□□ -2.26
NF1-213ENST00000489712 TCTEX1D1Q8N7M0 179 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 C1orf54Q8WWF1 131 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 LPAR5Q9H1C0 372 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 BOKQ9UMX3 212 aaPredicted RBP0.95□□□□□ -2.26
NF1-213ENST00000489712 DNAJC15Q9Y5T4 150 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 BAZ2BQ9UIF8 2168 aaKnown RBP0.95□□□□□ -2.26
NF1-213ENST00000489712 RFX7Q2KHR2 1363 aa0.95□□□□□ -2.26
NF1-213ENST00000489712 CACNA1GO43497 2377 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 FANCMQ8IYD8 2048 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 CECR2Q9BXF3 1484 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 PTPRFP10586 1907 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 MYH1P12882 1939 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 TRAV23DV6A0A075B6W5 121 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 FAM92AA1XBS5 289 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 CDC42EP2O14613 210 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 NPFFO15130 113 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 CD3DP04234 171 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 LINC00694P0DN24 101 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 ZNF25P17030 456 aaPredicted RBP0.94□□□□□ -2.26
NF1-213ENST00000489712 SELENOWP63302 87 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 UNQ5815/PRO19632Q6UWF5 114 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 ZCCHC23Q6ZST2 131 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 FAM19A2Q8N3H0 131 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 PLPP5Q8NEB5 264 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 ARL11Q969Q4 196 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 PSMG3Q9BT73 122 aaPredicted RBP0.94□□□□□ -2.26
NF1-213ENST00000489712 WFDC10AQ9H1F0 79 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 TAS2R8Q9NYW2 309 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 ERG28Q9UKR5 140 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 ZFP30Q9Y2G7 519 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 NOP16Q9Y3C1 178 aaKnown RBP0.94□□□□□ -2.26
NF1-213ENST00000489712 FGD6Q6ZV73 1430 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 CDK5RAP2Q96SN8 1893 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 POLEQ07864 2286 aa0.94□□□□□ -2.26
NF1-213ENST00000489712 ARHGAP31Q2M1Z3 1444 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 TRBV20-1A0A075B6N2 111 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 TRAV2A0A0B4J234 112 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 J3QLW9 94 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 KLF7O75840 302 aaPredicted RBP0.93□□□□□ -2.26
NF1-213ENST00000489712 ADCYAP1P18509 176 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 POLR2JP52435 117 aaKnown RBP0.93□□□□□ -2.26
NF1-213ENST00000489712 RRAS2P62070 204 aaPredicted RBP0.93□□□□□ -2.26
NF1-213ENST00000489712 SPATA45Q537H7 98 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 RPL13AP3Q6NVV1 102 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 SCIMPQ6UWF3 145 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 SNX29P2Q8IUI4 249 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 ATP6V0E2Q8NHE4 81 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 C10orf105Q8TEF2 133 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 TMEM191AQ9H0A3 160 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 CCDC167Q9P0B6 97 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 KIAA1549Q9HCM3 1950 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 USP54Q70EL1 1684 aa0.93□□□□□ -2.26
NF1-213ENST00000489712 UHRF1BP1LA0JNW5 1464 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms