RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ARPC5LQ9BPX5 153 aa15.96■□□□□ 0.15
COL9A3-213ENST00000489045 ACOT6Q3I5F7 207 aaPredicted RBP15.95■□□□□ 0.14
COL9A3-213ENST00000489045 C6orf223Q8N319 242 aa15.95■□□□□ 0.14
COL9A3-213ENST00000489045 DIRC3C9JPN6 131 aa15.94■□□□□ 0.14
COL9A3-213ENST00000489045 RAB2AP61019 212 aa15.94■□□□□ 0.14
COL9A3-213ENST00000489045 ZNF266Q14584 549 aa15.94■□□□□ 0.14
COL9A3-213ENST00000489045 ESRGQ1W209 222 aa15.94■□□□□ 0.14
COL9A3-213ENST00000489045 VSIG2Q96IQ7 327 aa15.94■□□□□ 0.14
COL9A3-213ENST00000489045 HYLS1Q96M11 299 aa15.94■□□□□ 0.14
COL9A3-213ENST00000489045 Q9H8V8 135 aa15.94■□□□□ 0.14
COL9A3-213ENST00000489045 MRPL16Q9NX20 251 aaKnown RBP15.94■□□□□ 0.14
COL9A3-213ENST00000489045 A0A1W2PPV4 95 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 PTTG1O95997 202 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 TNP2Q05952 138 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 ZNF415Q09FC8 603 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 MUC21Q5SSG8 566 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 OTORQ9NRC9 128 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 RPH3ALQ9UNE2 315 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 LENEPQ9Y5L5 61 aa15.92■□□□□ 0.14
COL9A3-213ENST00000489045 A0A096LPF7 62 aa15.91■□□□□ 0.14
COL9A3-213ENST00000489045 PGPA6NDG6 321 aa15.91■□□□□ 0.14
COL9A3-213ENST00000489045 MED14OSP0DP75 135 aa15.91■□□□□ 0.14
COL9A3-213ENST00000489045 PQLC2Q6ZP29 291 aa15.91■□□□□ 0.14
COL9A3-213ENST00000489045 ST6GAL2Q96JF0 529 aa15.91■□□□□ 0.14
COL9A3-213ENST00000489045 UPK3BQ9BT76 320 aa15.91■□□□□ 0.14
COL9A3-213ENST00000489045 MRPS16Q9Y3D3 137 aaKnown RBP15.91■□□□□ 0.14
COL9A3-213ENST00000489045 HMGB3O15347 200 aaKnown RBP15.9■□□□□ 0.14
COL9A3-213ENST00000489045 IGHV3-53P01767 116 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 Q6AWC8 147 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 ZNF575Q86XF7 245 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 OR10G4Q8NGN3 311 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 OR10G9Q8NGN4 311 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 OR10G7Q8NGN6 311 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 CMTM2Q8TAZ6 248 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 KRTAP17-1Q9BYP8 105 aa15.9■□□□□ 0.14
COL9A3-213ENST00000489045 FAM74A1Q5RGS3 127 aa15.89■□□□□ 0.13
COL9A3-213ENST00000489045 TMED6Q8WW62 240 aa15.89■□□□□ 0.13
COL9A3-213ENST00000489045 KRTAP1-5Q9BYS1 174 aa15.89■□□□□ 0.13
COL9A3-213ENST00000489045 MED28Q9H204 178 aa15.89■□□□□ 0.13
COL9A3-213ENST00000489045 TTC32Q5I0X7 151 aa15.88■□□□□ 0.13
COL9A3-213ENST00000489045 GOLT1AQ6ZVE7 132 aa15.88■□□□□ 0.13
COL9A3-213ENST00000489045 HSD17B11Q8NBQ5 300 aa15.88■□□□□ 0.13
COL9A3-213ENST00000489045 MDFICQ9P1T7 246 aa15.88■□□□□ 0.13
COL9A3-213ENST00000489045 PAX4O43316 350 aa15.87■□□□□ 0.13
COL9A3-213ENST00000489045 FAM159AQ6UWV7 190 aa15.87■□□□□ 0.13
COL9A3-213ENST00000489045 AQP10Q96PS8 301 aa15.87■□□□□ 0.13
COL9A3-213ENST00000489045 ARL14EPLP0DKL9 152 aa15.86■□□□□ 0.13
COL9A3-213ENST00000489045 CDC34P49427 236 aaPredicted RBP15.86■□□□□ 0.13
COL9A3-213ENST00000489045 GNG5P63218 68 aa15.86■□□□□ 0.13
COL9A3-213ENST00000489045 TMEM183BQ1AE95 376 aa15.86■□□□□ 0.13
COL9A3-213ENST00000489045 TMEM183AQ8IXX5 376 aa15.86■□□□□ 0.13
COL9A3-213ENST00000489045 OR2G3Q8NGZ4 309 aa15.86■□□□□ 0.13
COL9A3-213ENST00000489045 ICOSQ9Y6W8 199 aa15.86■□□□□ 0.13
COL9A3-213ENST00000489045 ARL6IP6Q8N6S5 226 aa15.85■□□□□ 0.13
COL9A3-213ENST00000489045 PRO0255Q9UI72 69 aa15.85■□□□□ 0.13
COL9A3-213ENST00000489045 NAGKQ9UJ70 344 aa15.85■□□□□ 0.13
COL9A3-213ENST00000489045 TRGV11A0A075B6L2 103 aa15.84■□□□□ 0.13
COL9A3-213ENST00000489045 TRAV8-1A0A0A6YYK1 113 aa15.84■□□□□ 0.13
COL9A3-213ENST00000489045 FHL2Q14192 279 aa15.84■□□□□ 0.13
COL9A3-213ENST00000489045 PSMG3Q9BT73 122 aaPredicted RBP15.84■□□□□ 0.13
COL9A3-213ENST00000489045 A0A1W2PPQ1 181 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 F6UZH7 168 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 STAG3L2P0CL84 134 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 STAG3L3P0CL85 134 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 ATP6V0CP27449 155 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 CRYBA4P53673 196 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 Q5BKY6 102 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 TVP23CQ96ET8 276 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 C8orf49Q96NF6 230 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 SPXQ9BT56 116 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 HHLA3Q9XRX5 114 aa15.83■□□□□ 0.12
COL9A3-213ENST00000489045 GIPP09681 153 aaPredicted RBP15.82■□□□□ 0.12
COL9A3-213ENST00000489045 SLAQ13239 276 aa15.82■□□□□ 0.12
COL9A3-213ENST00000489045 TDRG1Q3Y452 100 aa15.82■□□□□ 0.12
COL9A3-213ENST00000489045 TRAV21A0A0B4J279 112 aa15.81■□□□□ 0.12
COL9A3-213ENST00000489045 SFTA3P0C7M3 94 aa15.81■□□□□ 0.12
COL9A3-213ENST00000489045 RAB24Q969Q5 203 aa15.81■□□□□ 0.12
COL9A3-213ENST00000489045 SH3BGRL3Q9H299 93 aa15.81■□□□□ 0.12
COL9A3-213ENST00000489045 TREM1Q9NP99 234 aa15.81■□□□□ 0.12
COL9A3-213ENST00000489045 TRGV4A0A0C4DH28 118 aa15.8■□□□□ 0.12
COL9A3-213ENST00000489045 RASL10AQ92737 203 aa15.8■□□□□ 0.12
COL9A3-213ENST00000489045 ZNF479Q96JC4 524 aa15.8■□□□□ 0.12
COL9A3-213ENST00000489045 GNRH2O43555 120 aa15.79■□□□□ 0.12
COL9A3-213ENST00000489045 MBP02144 154 aa15.79■□□□□ 0.12
COL9A3-213ENST00000489045 GCHFRP30047 84 aa15.79■□□□□ 0.12
COL9A3-213ENST00000489045 SERF2P84101 59 aa15.79■□□□□ 0.12
COL9A3-213ENST00000489045 SUN5Q8TC36 379 aa15.79■□□□□ 0.12
COL9A3-213ENST00000489045 ASB13Q8WXK3 278 aa15.79■□□□□ 0.12
COL9A3-213ENST00000489045 SGK494Q96LW2 274 aa15.79■□□□□ 0.12
COL9A3-213ENST00000489045 PCLOQ9Y6V0 5065 aa15.78■□□□□ 0.12
COL9A3-213ENST00000489045 C16orf90A8MZG2 172 aa15.78■□□□□ 0.12
COL9A3-213ENST00000489045 SIVA1O15304 175 aa15.78■□□□□ 0.12
COL9A3-213ENST00000489045 NXPH4O95158 308 aa15.78■□□□□ 0.12
COL9A3-213ENST00000489045 MRPL23Q16540 153 aaKnown RBP15.78■□□□□ 0.12
COL9A3-213ENST00000489045 C5orf17Q8NAS9 161 aa15.78■□□□□ 0.12
COL9A3-213ENST00000489045 INO80EQ8NBZ0 244 aaPredicted RBP15.78■□□□□ 0.12
COL9A3-213ENST00000489045 IGHV3-16A0A0C4DH30 117 aa15.77■□□□□ 0.12
COL9A3-213ENST00000489045 SERTM2A0A1B0GWG4 89 aa15.77■□□□□ 0.12
COL9A3-213ENST00000489045 RNF222A6NCQ9 220 aa15.77■□□□□ 0.12
COL9A3-213ENST00000489045 TCRAP04437 139 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms