RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 HMGB3O15347 200 aaKnown RBP12.22□□□□□ -0.45
ATG3-205ENST00000488910 CCL18P55774 89 aa12.22□□□□□ -0.45
ATG3-205ENST00000488910 OR2T35Q8NGX2 323 aa12.22□□□□□ -0.45
ATG3-205ENST00000488910 RAB24Q969Q5 203 aa12.22□□□□□ -0.45
ATG3-205ENST00000488910 GNPNAT1Q96EK6 184 aaPredicted RBP12.22□□□□□ -0.45
ATG3-205ENST00000488910 ARPC5LQ9BPX5 153 aa12.22□□□□□ -0.45
ATG3-205ENST00000488910 TNFSF18Q9UNG2 199 aa12.22□□□□□ -0.45
ATG3-205ENST00000488910 NACAE9PAV3 2078 aa12.22□□□□□ -0.45
ATG3-205ENST00000488910 TRGV2A0A075B6R0 118 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 TRAV26-1A0A087WT03 109 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 FXYD6-FXYD2A0A087WZ82 144 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 SPINK4O60575 86 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 ARL14EPLP0DKL9 152 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 Q6AWC8 147 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 Q6ZR54 194 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 SUN5Q8TC36 379 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 ST6GAL2Q96JF0 529 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 TP53TG3Q9ULZ0 132 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.45
ATG3-205ENST00000488910 HECTD4Q9Y4D8 3996 aa12.21□□□□□ -0.46
ATG3-205ENST00000488910 IGLV2-18A0A075B6J9 118 aa12.2□□□□□ -0.46
ATG3-205ENST00000488910 RNF222A6NCQ9 220 aa12.2□□□□□ -0.46
ATG3-205ENST00000488910 HOXA5P20719 270 aa12.2□□□□□ -0.46
ATG3-205ENST00000488910 Q6ZQT7 251 aa12.2□□□□□ -0.46
ATG3-205ENST00000488910 GOLT1AQ6ZVE7 132 aa12.2□□□□□ -0.46
ATG3-205ENST00000488910 ACTR3CQ9C0K3 210 aaPredicted RBP12.2□□□□□ -0.46
ATG3-205ENST00000488910 TMPRSS5Q9H3S3 457 aa12.2□□□□□ -0.46
ATG3-205ENST00000488910 DNAH2Q9P225 4427 aa12.2□□□□□ -0.46
ATG3-205ENST00000488910 DNAH17Q9UFH2 4485 aa12.19□□□□□ -0.46
ATG3-205ENST00000488910 SERTM2A0A1B0GWG4 89 aa12.19□□□□□ -0.46
ATG3-205ENST00000488910 CXorf1O96002 111 aa12.19□□□□□ -0.46
ATG3-205ENST00000488910 GCHFRP30047 84 aa12.19□□□□□ -0.46
ATG3-205ENST00000488910 RPL7L1Q6DKI1 246 aaKnown RBP12.19□□□□□ -0.46
ATG3-205ENST00000488910 SH3BGRL3Q9H299 93 aa12.19□□□□□ -0.46
ATG3-205ENST00000488910 TMEM167BQ9NRX6 74 aa12.19□□□□□ -0.46
ATG3-205ENST00000488910 RPH3ALQ9UNE2 315 aa12.19□□□□□ -0.46
ATG3-205ENST00000488910 ZNF415Q09FC8 603 aa12.18□□□□□ -0.46
ATG3-205ENST00000488910 FAM159AQ6UWV7 190 aa12.18□□□□□ -0.46
ATG3-205ENST00000488910 A0A0J9YY99 117 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 TAAR5O14804 337 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 RTL8CO15255 209 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 SOHLH1Q5JUK2 328 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 MUC21Q5SSG8 566 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 C5orf17Q8NAS9 161 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 ZNRF2Q8NHG8 242 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 LINC00588Q9Y4M8 146 aa12.17□□□□□ -0.46
ATG3-205ENST00000488910 MUC4Q99102 2169 aa12.16□□□□□ -0.46
ATG3-205ENST00000488910 FAT2Q9NYQ8 4349 aa12.16□□□□□ -0.46
ATG3-205ENST00000488910 K7EQM0 130 aa12.16□□□□□ -0.46
ATG3-205ENST00000488910 TDRG1Q3Y452 100 aa12.16□□□□□ -0.46
ATG3-205ENST00000488910 SSX7Q7RTT5 188 aa12.16□□□□□ -0.46
ATG3-205ENST00000488910 SPXQ9BT56 116 aa12.16□□□□□ -0.46
ATG3-205ENST00000488910 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
ATG3-205ENST00000488910 TRGV11A0A075B6L2 103 aa12.15□□□□□ -0.46
ATG3-205ENST00000488910 TRAV21A0A0B4J279 112 aa12.15□□□□□ -0.46
ATG3-205ENST00000488910 G3V3Q6 166 aa12.15□□□□□ -0.46
ATG3-205ENST00000488910 GNG5P63218 68 aa12.15□□□□□ -0.46
ATG3-205ENST00000488910 SLAQ13239 276 aa12.15□□□□□ -0.46
ATG3-205ENST00000488910 MDFICQ9P1T7 246 aa12.15□□□□□ -0.46
ATG3-205ENST00000488910 TRAV8-1A0A0A6YYK1 113 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 TCRAP04437 139 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 SUMO1P63165 101 aaKnown RBP12.14□□□□□ -0.47
ATG3-205ENST00000488910 TMEM183BQ1AE95 376 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 C1orf134Q5TEV5 83 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 TMEM183AQ8IXX5 376 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 TVP23CQ96ET8 276 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
ATG3-205ENST00000488910 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
ATG3-205ENST00000488910 NBDYA0A0U1RRE5 68 aa12.13□□□□□ -0.47
ATG3-205ENST00000488910 CTXND1A0A1B0GTU2 59 aa12.13□□□□□ -0.47
ATG3-205ENST00000488910 A0A1W2PRE2 83 aa12.13□□□□□ -0.47
ATG3-205ENST00000488910 ARPC5O15511 151 aa12.13□□□□□ -0.47
ATG3-205ENST00000488910 AKR1C8PQ5T2L2 129 aa12.13□□□□□ -0.47
ATG3-205ENST00000488910 RASL10AQ92737 203 aa12.13□□□□□ -0.47
ATG3-205ENST00000488910 EPDR1Q9UM22 224 aa12.13□□□□□ -0.47
ATG3-205ENST00000488910 FBLL1A6NHQ2 334 aaKnown RBP12.12□□□□□ -0.47
ATG3-205ENST00000488910 ESRGQ1W209 222 aa12.12□□□□□ -0.47
ATG3-205ENST00000488910 KCNS1Q96KK3 526 aa12.12□□□□□ -0.47
ATG3-205ENST00000488910 Q9H8V8 135 aa12.12□□□□□ -0.47
ATG3-205ENST00000488910 PRO0255Q9UI72 69 aa12.12□□□□□ -0.47
ATG3-205ENST00000488910 NAGKQ9UJ70 344 aa12.12□□□□□ -0.47
ATG3-205ENST00000488910 A0A096LPF7 62 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 A0A1B0GVY2 172 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 GGTLC3B5MD39 225 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 PAX4O43316 350 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 ZNF726P1Q15940 193 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 IQCF2Q8IXL9 164 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 CYB561D1Q8N8Q1 229 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 SGK494Q96LW2 274 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 UPK3BQ9BT76 320 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 CYTL1Q9NRR1 136 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 PSG8Q9UQ74 426 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 HHLA3Q9XRX5 114 aa12.11□□□□□ -0.47
ATG3-205ENST00000488910 F6UZH7 168 aa12.1□□□□□ -0.47
ATG3-205ENST00000488910 GNRH2O43555 120 aa12.1□□□□□ -0.47
ATG3-205ENST00000488910 IGHV3-53P01767 116 aa12.1□□□□□ -0.47
ATG3-205ENST00000488910 FHL2Q14192 279 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms