RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 TMEM78Q5T7P6 136 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 C11orf72Q8NBR9 251 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 Q8TAT8 98 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 RAB24Q969Q5 203 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 PYGO2Q9BRQ0 406 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 NDUFAF3Q9BU61 184 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 NOP10Q9NPE3 64 aaKnown RBP10.01□□□□□ -0.81
COL9A2-208ENST00000488463 OTORQ9NRC9 128 aa10.01□□□□□ -0.81
COL9A2-208ENST00000488463 TIMM8BQ9Y5J9 83 aaPredicted RBP10.01□□□□□ -0.81
COL9A2-208ENST00000488463 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
COL9A2-208ENST00000488463 DEFB130BP0DP73 79 aa10□□□□□ -0.81
COL9A2-208ENST00000488463 DEFB130AP0DP74 79 aa10□□□□□ -0.81
COL9A2-208ENST00000488463 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
COL9A2-208ENST00000488463 TEX261Q6UWH6 196 aa10□□□□□ -0.81
COL9A2-208ENST00000488463 ARL6IP6Q8N6S5 226 aa10□□□□□ -0.81
COL9A2-208ENST00000488463 PKD1P98161 4303 aa10□□□□□ -0.81
COL9A2-208ENST00000488463 NACAE9PAV3 2078 aa10□□□□□ -0.81
COL9A2-208ENST00000488463 MUC4Q99102 2169 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 PGPA6NDG6 321 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 CBY3A6NI87 242 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 GPX1P07203 203 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 HTN3P15516 51 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 SULT1A2P50226 295 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 ZNF726P1Q15940 193 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 ANXA2RQ3ZCQ2 193 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 TMEM88Q6PEY1 159 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 ALKAL2Q6UX46 152 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 FAM213BQ8TBF2 198 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 RXFP4Q8TDU9 374 aa9.99□□□□□ -0.81
COL9A2-208ENST00000488463 CTXND1A0A1B0GTU2 59 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 H2AFB1P0C5Y9 115 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 GCHFRP30047 84 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 CSN1S1P47710 185 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 DAZ2Q13117 558 aaKnown RBP9.98□□□□□ -0.81
COL9A2-208ENST00000488463 CCDC28AQ8IWP9 274 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 ZNF680Q8NEM1 530 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 TVP23CQ96ET8 276 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 LENEPQ9Y5L5 61 aa9.98□□□□□ -0.81
COL9A2-208ENST00000488463 CXorf1O96002 111 aa9.97□□□□□ -0.81
COL9A2-208ENST00000488463 EIF4E3Q8N5X7 224 aaKnown RBP9.97□□□□□ -0.81
COL9A2-208ENST00000488463 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
COL9A2-208ENST00000488463 TP53TG3Q9ULZ0 132 aa9.97□□□□□ -0.81
COL9A2-208ENST00000488463 PKHD1P08F94 4074 aa9.97□□□□□ -0.81
COL9A2-208ENST00000488463 ATP5G1P05496 136 aa9.96□□□□□ -0.82
COL9A2-208ENST00000488463 ATP5G3P48201 142 aa9.96□□□□□ -0.82
COL9A2-208ENST00000488463 GNG5P63218 68 aa9.96□□□□□ -0.82
COL9A2-208ENST00000488463 Q6AWC8 147 aa9.96□□□□□ -0.82
COL9A2-208ENST00000488463 POM121L12Q8N7R1 296 aa9.96□□□□□ -0.82
COL9A2-208ENST00000488463 SFT2D1Q8WV19 159 aa9.96□□□□□ -0.82
COL9A2-208ENST00000488463 GSN-AS1Q9NRJ2 163 aa9.96□□□□□ -0.82
COL9A2-208ENST00000488463 IGHV1OR15-1A0A075B7D0 117 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 TRAV8-1A0A0A6YYK1 113 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 GGTLC3B5MD39 225 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 P0DMU3 169 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 FAM231AP0DMU4 169 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 FAM231CP0DMU5 169 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 PPT1P50897 306 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 Q6ZTI0 123 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 GOLT1AQ6ZVE7 132 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 IQCF2Q8IXL9 164 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 KLF12Q9Y4X4 402 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 HERC2O95714 4834 aa9.95□□□□□ -0.82
COL9A2-208ENST00000488463 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 MAP1LC3B2A6NCE7 125 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 SNURFLB1AK76 121 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 IGLV2-11P01706 119 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 HOXA5P20719 270 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 TCL1AP56279 114 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 FAM74A1Q5RGS3 127 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 IBA57Q5T440 356 aaKnown RBP9.94□□□□□ -0.82
COL9A2-208ENST00000488463 CMTM2Q8TAZ6 248 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 MBD3L1Q8WWY6 194 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 C18orf15Q96N68 181 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 MAP1LC3BQ9GZQ8 125 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 TMEM167BQ9NRX6 74 aa9.94□□□□□ -0.82
COL9A2-208ENST00000488463 GAGE12BA1L429 117 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 F5H768 121 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 SPINK4O60575 86 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 GAGE7O76087 117 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 IFNA1P01562 189 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 TCRAP04437 139 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 GAGE12FP0CL80 117 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 GAGE12GP0CL81 117 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 GAGE12IP0CL82 117 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 C15orf53Q8NAA6 179 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 C5orf17Q8NAS9 161 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 TMPRSS5Q9H3S3 457 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 RPH3ALQ9UNE2 315 aa9.93□□□□□ -0.82
COL9A2-208ENST00000488463 RGS13O14921 159 aa9.92□□□□□ -0.82
COL9A2-208ENST00000488463 SUMO1P63165 101 aaKnown RBP9.92□□□□□ -0.82
COL9A2-208ENST00000488463 TDRG1Q3Y452 100 aa9.92□□□□□ -0.82
COL9A2-208ENST00000488463 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
COL9A2-208ENST00000488463 A0A1W2PRE2 83 aa9.91□□□□□ -0.82
COL9A2-208ENST00000488463 TAGLN2P37802 199 aaKnown RBP9.91□□□□□ -0.82
COL9A2-208ENST00000488463 FHITP49789 147 aa9.91□□□□□ -0.82
COL9A2-208ENST00000488463 RNF212Q495C1 297 aa9.91□□□□□ -0.82
COL9A2-208ENST00000488463 MUC21Q5SSG8 566 aa9.91□□□□□ -0.82
COL9A2-208ENST00000488463 SGK494Q96LW2 274 aa9.91□□□□□ -0.82
COL9A2-208ENST00000488463 MDFICQ9P1T7 246 aa9.91□□□□□ -0.82
COL9A2-208ENST00000488463 EPDR1Q9UM22 224 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms