RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 BTF3L4Q96K17 158 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 LINC00477Q96M19 166 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 VGLL1Q99990 258 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 PPP1R14DQ9NXH3 145 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 LENEPQ9Y5L5 61 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 CSMD3Q7Z407 3707 aa9.02□□□□□ -0.97
HLA-DOB-209ENST00000488325 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 RBMY1EA6NEQ0 496 aaKnown RBP9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 OR4C46A6NHA9 309 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 ZNF705GA8MUZ8 300 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 RBMY1DP0C7P1 496 aaKnown RBP9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 EGFEM1PQ0D2K5 195 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 SMUG1Q53HV7 270 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 COX8CQ7Z4L0 72 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 OR8A1Q8NGG7 326 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 OR2K2Q8NGT1 345 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 PRR25Q96S07 402 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 SPAG8Q99932 426 aaPredicted RBP9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 SELENOKQ9Y6D0 94 aa9.01□□□□□ -0.97
HLA-DOB-209ENST00000488325 NPIPB6E9PJ23 425 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 P01737 135 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 ZNF688P0C7X2 276 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 RPL19P84098 196 aaKnown RBP9□□□□□ -0.97
HLA-DOB-209ENST00000488325 HIST1H1AQ02539 215 aaPredicted RBP9□□□□□ -0.97
HLA-DOB-209ENST00000488325 ERCC8Q13216 396 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 PSMG4Q5JS54 123 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 TMEM61Q8N0U2 210 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 NUDT10Q8NFP7 164 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 OR4B1Q8NGF8 309 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 NUDT11Q96G61 164 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 AGPAT4-IT1Q9H0P7 198 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 RNASE7Q9H1E1 156 aaKnown RBP9□□□□□ -0.97
HLA-DOB-209ENST00000488325 IL36BQ9NZH7 164 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 V9GYV3 84 aa9□□□□□ -0.97
HLA-DOB-209ENST00000488325 TRAV9-1A0A075B6T8 112 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 TRBV7-9A0A0J9YWB2 115 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 C19orf71A6NCJ1 209 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 SAP30O75446 220 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 DUSP14O95147 198 aaKnown RBP8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 CD300EQ496F6 205 aaPredicted RBP8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 CT83Q5H943 113 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 EBLN2Q6P2I7 272 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 FAM24BQ8N5W8 94 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 Q8TAT8 98 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 ZC2HC1AQ96GY0 325 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 RPP21Q9H633 154 aaKnown RBP8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 URGCP-MRPS24S4R325 110 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 STARD9Q9P2P6 4700 aa8.99□□□□□ -0.97
HLA-DOB-209ENST00000488325 PFN1P07737 140 aaKnown RBP8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 PRB4P10163 310 aaPredicted RBP8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 CMC4P56277 68 aaPredicted RBP8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 ELOBQ15370 118 aa8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 FAM162BQ5T6X4 162 aa8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 LINC00482Q8N8I6 264 aa8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 C8orf49Q96NF6 230 aa8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 ASCL2Q99929 193 aa8.98□□□□□ -0.97
HLA-DOB-209ENST00000488325 TRBV24-1A0A075B6N3 115 aa8.97□□□□□ -0.97
HLA-DOB-209ENST00000488325 COLCA2A8K830 154 aa8.97□□□□□ -0.97
HLA-DOB-209ENST00000488325 A8MWL6 223 aa8.97□□□□□ -0.97
HLA-DOB-209ENST00000488325 FOXI2Q6ZQN5 318 aa8.97□□□□□ -0.97
HLA-DOB-209ENST00000488325 YPEL4Q96NS1 127 aa8.97□□□□□ -0.97
HLA-DOB-209ENST00000488325 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
HLA-DOB-209ENST00000488325 GPR61Q9BZJ8 451 aa8.97□□□□□ -0.97
HLA-DOB-209ENST00000488325 A0A0J9YX75 114 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 A0A1W2PPQ1 181 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 XKRY2A2RUG3 117 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 FABP5P3A8MUU1 101 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 SH2D1AO60880 128 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 INSL3P51460 131 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 RPS20P60866 119 aaKnown RBP8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 ZFAND6Q6FIF0 208 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 LINC00322Q6ZN03 302 aaPredicted RBP8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 OR2D3Q8NGH3 330 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 TSKUQ8WUA8 353 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 FAM210BQ96KR6 192 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 PYGO2Q9BRQ0 406 aa8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 HUWE1Q7Z6Z7 4374 aaKnown RBP8.96□□□□□ -0.98
HLA-DOB-209ENST00000488325 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 FAM231BA6NCW3 169 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 F6UB75 175 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 IGLV1-51P01701 117 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 ZNF705DP0CH99 300 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 ZNF705BP0CI00 300 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 CRISP2P16562 243 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 RAB5AP20339 215 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 LEPP41159 167 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 DEFB131AP59861 70 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 C9orf66Q5T8R8 295 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 MCRIP2Q9BUT9 160 aaKnown RBP8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 GFRA4Q9GZZ7 299 aa8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 SAV1Q9H4B6 383 aaPredicted RBP8.95□□□□□ -0.98
HLA-DOB-209ENST00000488325 TGIF2-C20orf24A0A0A6YYL0 155 aa8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 TMEM189A5PLL7 270 aa8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 CXCL1P09341 107 aa8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 TSPOP30536 169 aa8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 CRIP1P50238 77 aa8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 FAM3BP58499 235 aaPredicted RBP8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 FAM19A4Q96LR4 140 aa8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 MAP6D1Q9H9H5 199 aa8.94□□□□□ -0.98
HLA-DOB-209ENST00000488325 NAT8BQ9UHF3 227 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms