RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 DAZ4Q86SG3 579 aaKnown RBP6.02□□□□□ -1.45
COL17A1-207ENST00000488320 TMEM183AQ8IXX5 376 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 HSD17B11Q8NBQ5 300 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 PRADC1Q9BSG0 188 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 DAZ3Q9NR90 486 aaKnown RBP6.02□□□□□ -1.45
COL17A1-207ENST00000488320 RABL2BQ9UNT1 228 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 TIMM9Q9Y5J7 89 aa6.02□□□□□ -1.45
COL17A1-207ENST00000488320 TRGV11A0A075B6L2 103 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 TRAV8-1A0A0A6YYK1 113 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 K7EPK0 472 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 ZNF253O75346 499 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 METTL15P1P0C7V9 234 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 GATA1P15976 413 aaPredicted RBP6.01□□□□□ -1.45
COL17A1-207ENST00000488320 VAMP1P23763 118 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 FFAR4Q5NUL3 377 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 FAM159AQ6UWV7 190 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 EXOC3-AS1Q8N2X6 119 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 Q8N3U1 123 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 ZFAND2AQ8N6M9 145 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 GTSF1LQ9H1H1 148 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 AAMDCQ9H7C9 122 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 VCX3AQ9NNX9 186 aa6.01□□□□□ -1.45
COL17A1-207ENST00000488320 TRBV19A0A075B6N1 114 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 IGKV2-40A0A087WW87 121 aaPredicted RBP6□□□□□ -1.45
COL17A1-207ENST00000488320 A0A0D9SG52 128 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 FNDC10F2Z333 226 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 RGS5O15539 181 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 SSSCA1O60232 199 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 IGKV2D-40P01614 121 aaPredicted RBP6□□□□□ -1.45
COL17A1-207ENST00000488320 UBE2MP61081 183 aaKnown RBP6□□□□□ -1.45
COL17A1-207ENST00000488320 C12orf45Q8N5I9 185 aaPredicted RBP6□□□□□ -1.45
COL17A1-207ENST00000488320 OR1L4Q8NGR5 311 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 SH3BGRL3Q9H299 93 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 ZNF492Q9P255 531 aa6□□□□□ -1.45
COL17A1-207ENST00000488320 FBLL1A6NHQ2 334 aaKnown RBP5.99□□□□□ -1.45
COL17A1-207ENST00000488320 M0R2P5 195 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 OR10J4P0C629 311 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 ZNF138P52744 262 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 ID3Q02535 119 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 RAB31Q13636 194 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 IL18Q14116 193 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 RHOHQ15669 191 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 BAK1Q16611 211 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 C14orf177Q52M58 125 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 TMEM128Q5BJH2 165 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 SLC25A29Q8N8R3 303 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 SMIM4Q8WVI0 70 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 SMIM8Q96KF7 97 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 C2orf50Q96LR7 162 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 SOSTQ9BQB4 213 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 GPN1Q9HCN4 374 aaPredicted RBP5.99□□□□□ -1.45
COL17A1-207ENST00000488320 NAGKQ9UJ70 344 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 URGCP-MRPS24S4R325 110 aa5.99□□□□□ -1.45
COL17A1-207ENST00000488320 IGHV3-73A0A0B4J1V6 119 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 ANKRD20A5PA0PJZ0 165 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 SEC11BP0C7V7 166 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 CAMLGP49069 296 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 TMEM14EPQ6UXP3 125 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 DPH3Q96FX2 82 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 MGST2Q99735 147 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 FUNDC2Q9BWH2 189 aa5.98□□□□□ -1.45
COL17A1-207ENST00000488320 TRBV6-4A0A1B0GX49 114 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 C5orf51A6NDU8 294 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 GNRH2O43555 120 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 NDUFB4O95168 129 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 PDE6HQ13956 83 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 ODF1Q14990 250 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 MIC13Q5XKP0 118 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 Q8TAT8 98 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 UBE2WQ96B02 151 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 PFDN5Q99471 154 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 MIXL1Q9H2W2 232 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 OR51M1Q9H341 326 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 SLC39A9Q9NUM3 307 aa5.97□□□□□ -1.45
COL17A1-207ENST00000488320 A0A087WXM4 84 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 KRTAP9-6A0A140TA67 174 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 CTDSPLO15194 276 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 CIDEAO60543 219 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 SFT2D2O95562 160 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 SCGB1D2O95969 90 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 PYYP10082 97 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 ZNF266Q14584 549 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 NRARPQ7Z6K4 114 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 DIRAS2Q96HU8 199 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 DNAJC30Q96LL9 226 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 ATP5SQ99766 215 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 GGACTQ9BVM4 153 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 TMEM14CQ9P0S9 112 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 KLK12Q9UKR0 248 aa5.96□□□□□ -1.46
COL17A1-207ENST00000488320 TRBV7-9A0A0J9YWB2 115 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 CTDSP2O14595 271 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 TSC22D2O75157 780 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 CSN1S1P47710 185 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 ARL16Q0P5N6 197 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 PPP1R1AQ13522 171 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 ZNF876PQ49A33 203 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 KCNIP4Q6PIL6 250 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 ZC2HC1AQ96GY0 325 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 LINC01600Q96MT4 127 aa5.95□□□□□ -1.46
COL17A1-207ENST00000488320 LPAP08519 4548 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms