RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 RGS13O14921 159 aa13.36□□□□□ -0.27
CD55-209ENST00000488171 UBE2L3P68036 154 aaKnown RBP13.36□□□□□ -0.27
CD55-209ENST00000488171 LYPD1Q8N2G4 141 aa13.36□□□□□ -0.27
CD55-209ENST00000488171 Q9H3A6 140 aa13.36□□□□□ -0.27
CD55-209ENST00000488171 MBD2Q9UBB5 411 aa13.36□□□□□ -0.27
CD55-209ENST00000488171 A0A096LPF7 62 aa13.35□□□□□ -0.27
CD55-209ENST00000488171 RBAKDNA6NC62 111 aa13.35□□□□□ -0.27
CD55-209ENST00000488171 IFNA5P01569 189 aa13.35□□□□□ -0.27
CD55-209ENST00000488171 SCGB1C1Q8TD33 95 aa13.35□□□□□ -0.27
CD55-209ENST00000488171 WFDC1Q9HC57 220 aa13.35□□□□□ -0.27
CD55-209ENST00000488171 MRPS16Q9Y3D3 137 aaKnown RBP13.35□□□□□ -0.27
CD55-209ENST00000488171 EIF3GO75821 320 aaKnown RBP eCLIP13.34□□□□□ -0.27
CD55-209ENST00000488171 CSN1S1P47710 185 aa13.34□□□□□ -0.27
CD55-209ENST00000488171 KHDC3LQ587J8 217 aa13.34□□□□□ -0.27
CD55-209ENST00000488171 ZNF266Q14584 549 aa13.33□□□□□ -0.27
CD55-209ENST00000488171 ST6GAL2Q96JF0 529 aa13.33□□□□□ -0.27
CD55-209ENST00000488171 MRPL16Q9NX20 251 aaKnown RBP13.33□□□□□ -0.27
CD55-209ENST00000488171 DIRC3C9JPN6 131 aa13.32□□□□□ -0.28
CD55-209ENST00000488171 TAS2R45P59539 299 aa13.32□□□□□ -0.28
CD55-209ENST00000488171 TTC32Q5I0X7 151 aa13.32□□□□□ -0.28
CD55-209ENST00000488171 ARPC5LQ9BPX5 153 aa13.32□□□□□ -0.28
CD55-209ENST00000488171 RYR1P21817 5038 aa13.31□□□□□ -0.28
CD55-209ENST00000488171 IGHV3-53P01767 116 aa13.31□□□□□ -0.28
CD55-209ENST00000488171 ZNF415Q09FC8 603 aa13.31□□□□□ -0.28
CD55-209ENST00000488171 MUC21Q5SSG8 566 aa13.31□□□□□ -0.28
CD55-209ENST00000488171 LENEPQ9Y5L5 61 aa13.31□□□□□ -0.28
CD55-209ENST00000488171 MUC4Q99102 2169 aa13.3□□□□□ -0.28
CD55-209ENST00000488171 A0A1W2PPQ1 181 aa13.3□□□□□ -0.28
CD55-209ENST00000488171 Q6AWC8 147 aa13.3□□□□□ -0.28
CD55-209ENST00000488171 HYLS1Q96M11 299 aa13.3□□□□□ -0.28
CD55-209ENST00000488171 OTORQ9NRC9 128 aa13.3□□□□□ -0.28
CD55-209ENST00000488171 C16orf90A8MZG2 172 aa13.29□□□□□ -0.28
CD55-209ENST00000488171 PAX4O43316 350 aa13.29□□□□□ -0.28
CD55-209ENST00000488171 ACOT6Q3I5F7 207 aaPredicted RBP13.29□□□□□ -0.28
CD55-209ENST00000488171 TMED6Q8WW62 240 aa13.29□□□□□ -0.28
CD55-209ENST00000488171 MDFICQ9P1T7 246 aa13.29□□□□□ -0.28
CD55-209ENST00000488171 ALG5Q9Y673 324 aa13.29□□□□□ -0.28
CD55-209ENST00000488171 PGPA6NDG6 321 aa13.28□□□□□ -0.28
CD55-209ENST00000488171 RAB2AP61019 212 aa13.28□□□□□ -0.28
CD55-209ENST00000488171 FHL2Q14192 279 aa13.28□□□□□ -0.28
CD55-209ENST00000488171 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
CD55-209ENST00000488171 ICOSQ9Y6W8 199 aa13.28□□□□□ -0.28
CD55-209ENST00000488171 CRYBA4P53673 196 aa13.27□□□□□ -0.29
CD55-209ENST00000488171 PQLC2Q6ZP29 291 aa13.27□□□□□ -0.29
CD55-209ENST00000488171 RPH3ALQ9UNE2 315 aa13.27□□□□□ -0.29
CD55-209ENST00000488171 A0A1W2PPV4 95 aa13.26□□□□□ -0.29
CD55-209ENST00000488171 TMEM183BQ1AE95 376 aa13.26□□□□□ -0.29
CD55-209ENST00000488171 TMEM183AQ8IXX5 376 aa13.26□□□□□ -0.29
CD55-209ENST00000488171 C8orf49Q96NF6 230 aa13.26□□□□□ -0.29
CD55-209ENST00000488171 HHLA3Q9XRX5 114 aa13.26□□□□□ -0.29
CD55-209ENST00000488171 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
CD55-209ENST00000488171 SLAQ13239 276 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 FAM74A1Q5RGS3 127 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 FAM159AQ6UWV7 190 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 GOLT1AQ6ZVE7 132 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 ARL6IP6Q8N6S5 226 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 OR10G4Q8NGN3 311 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 OR10G9Q8NGN4 311 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 OR10G7Q8NGN6 311 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 CMTM2Q8TAZ6 248 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
CD55-209ENST00000488171 TRGV11A0A075B6L2 103 aa13.24□□□□□ -0.29
CD55-209ENST00000488171 SIVA1O15304 175 aa13.24□□□□□ -0.29
CD55-209ENST00000488171 BTF3P20290 206 aaKnown RBP13.24□□□□□ -0.29
CD55-209ENST00000488171 TDRG1Q3Y452 100 aa13.24□□□□□ -0.29
CD55-209ENST00000488171 RASL10AQ92737 203 aa13.24□□□□□ -0.29
CD55-209ENST00000488171 TVP23CQ96ET8 276 aa13.24□□□□□ -0.29
CD55-209ENST00000488171 SPXQ9BT56 116 aa13.24□□□□□ -0.29
CD55-209ENST00000488171 LRP1BQ9NZR2 4599 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 HSPG2P98160 4391 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 TRAV8-1A0A0A6YYK1 113 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 NXPH4O95158 308 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 SFTA3P0C7M3 94 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 IQCF2Q8IXL9 164 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 ZNF479Q96JC4 524 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 KRTAP4-5Q9BYR2 181 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 NAGKQ9UJ70 344 aa13.23□□□□□ -0.29
CD55-209ENST00000488171 ARL14EPLP0DKL9 152 aa13.22□□□□□ -0.29
CD55-209ENST00000488171 LINC00315P59091 139 aa13.22□□□□□ -0.29
CD55-209ENST00000488171 GNG5P63218 68 aa13.22□□□□□ -0.29
CD55-209ENST00000488171 LYPD5Q6UWN5 251 aa13.22□□□□□ -0.29
CD55-209ENST00000488171 SPATA12Q7Z6I5 190 aa13.22□□□□□ -0.29
CD55-209ENST00000488171 OR2G3Q8NGZ4 309 aa13.22□□□□□ -0.29
CD55-209ENST00000488171 AQP10Q96PS8 301 aa13.22□□□□□ -0.29
CD55-209ENST00000488171 TRGV4A0A0C4DH28 118 aa13.21□□□□□ -0.29
CD55-209ENST00000488171 F6UZH7 168 aa13.21□□□□□ -0.29
CD55-209ENST00000488171 GNRH2O43555 120 aa13.21□□□□□ -0.29
CD55-209ENST00000488171 CDK2AP2O75956 126 aa13.21□□□□□ -0.29
CD55-209ENST00000488171 PTTG1O95997 202 aa13.21□□□□□ -0.29
CD55-209ENST00000488171 CDC34P49427 236 aaPredicted RBP13.21□□□□□ -0.29
CD55-209ENST00000488171 MRPL23Q16540 153 aaKnown RBP13.21□□□□□ -0.29
CD55-209ENST00000488171 Q6ZRN7 208 aaPredicted RBP13.21□□□□□ -0.29
CD55-209ENST00000488171 HSD17B11Q8NBQ5 300 aa13.21□□□□□ -0.29
CD55-209ENST00000488171 IGHV3-16A0A0C4DH30 117 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 STAG3L2P0CL84 134 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 STAG3L3P0CL85 134 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 KRTAP10-2P60368 255 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 TREM1Q9NP99 234 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 ABCA13Q86UQ4 5058 aa13.2□□□□□ -0.3
CD55-209ENST00000488171 TRAV21A0A0B4J279 112 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms