RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CYTL1Q9NRR1 136 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 RPH3ALQ9UNE2 315 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 KMT2AQ03164 3969 aa5.06□□□□□ -1.6
UBE4B-209ENST00000487244 MUC4Q99102 2169 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 TRAV8-1A0A0A6YYK1 113 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 BORCS7-ASMTA0A0B4J1R7 106 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 TEX48A0A1B0GUV7 120 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 PGPA6NDG6 321 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 LYRM9A8MSI8 78 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 DIRC3C9JPN6 131 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 ZNF324O75467 553 aaPredicted RBP5.05□□□□□ -1.6
UBE4B-209ENST00000487244 SLC25A5P05141 298 aaKnown RBP5.05□□□□□ -1.6
UBE4B-209ENST00000487244 STAG3L2P0CL84 134 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 STAG3L3P0CL85 134 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 GCHFRP30047 84 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 ZNF138P52744 262 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 TMEM78Q5T7P6 136 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 PQLC2Q6ZP29 291 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 LYPD1Q8N2G4 141 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 C11orf72Q8NBR9 251 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 TMEM263Q8WUH6 116 aaKnown RBP5.05□□□□□ -1.6
UBE4B-209ENST00000487244 LINC00477Q96M19 166 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 C20orf144Q9BQM9 153 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 OTORQ9NRC9 128 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 ZNF492Q9P255 531 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
UBE4B-209ENST00000487244 EPPK1P58107 5090 aaKnown RBP5.04□□□□□ -1.6
UBE4B-209ENST00000487244 GGTLC3B5MD39 225 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 GPX1P07203 203 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 CSN1S1P47710 185 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 TCTAP57738 103 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 SERF2P84101 59 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 TMEM88Q6PEY1 159 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 GOLT1AQ6ZVE7 132 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 GNPNAT1Q96EK6 184 aaPredicted RBP5.04□□□□□ -1.6
UBE4B-209ENST00000487244 TVP23CQ96ET8 276 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 SGK494Q96LW2 274 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 C8orf49Q96NF6 230 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 PYGO2Q9BRQ0 406 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 NDUFAF3Q9BU61 184 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 GSN-AS1Q9NRJ2 163 aa5.04□□□□□ -1.6
UBE4B-209ENST00000487244 TIMM8BQ9Y5J9 83 aaPredicted RBP5.04□□□□□ -1.6
UBE4B-209ENST00000487244 GAGE12BA1L429 117 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 RBAKDNA6NC62 111 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 CBY3A6NI87 242 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 F5H768 121 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 F6UZH7 168 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 GAGE7O76087 117 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 MBP02144 154 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 NMBP08949 121 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 GAGE12FP0CL80 117 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 GAGE12GP0CL81 117 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 GAGE12IP0CL82 117 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 FHITP49789 147 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 FGF8P55075 233 aaPredicted RBP5.03□□□□□ -1.6
UBE4B-209ENST00000487244 MUC21Q5SSG8 566 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 ZNF493Q6ZR52 646 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 Q6ZTI0 123 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 CCDC28AQ8IWP9 274 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 IQCF2Q8IXL9 164 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 KCNRGQ8N5I3 272 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 LINC00612Q8N6U2 182 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 CMTM2Q8TAZ6 248 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 SUN5Q8TC36 379 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 ACTR3CQ9C0K3 210 aaPredicted RBP5.03□□□□□ -1.6
UBE4B-209ENST00000487244 TMPRSS5Q9H3S3 457 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 KLF12Q9Y4X4 402 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 VPS13DQ5THJ4 4388 aa5.03□□□□□ -1.6
UBE4B-209ENST00000487244 IGHV1OR15-1A0A075B7D0 117 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 CTXND1A0A1B0GTU2 59 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 SNURFLB1AK76 121 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 TAAR5O14804 337 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 CXorf1O96002 111 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 UBE2G2P60604 165 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 ZNF345Q14585 488 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 ANXA2RQ3ZCQ2 193 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 EIF4E3Q8N5X7 224 aaKnown RBP5.02□□□□□ -1.61
UBE4B-209ENST00000487244 RXFP4Q8TDU9 374 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 ST6GAL2Q96JF0 529 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 ARPC5LQ9BPX5 153 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 LINC00467Q9BRT7 94 aa5.02□□□□□ -1.61
UBE4B-209ENST00000487244 FRAS1Q86XX4 4008 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 hCG_2014768A0A024R1R8 64 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 TRBV7-9A0A0J9YWB2 115 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 MAP1LC3B2A6NCE7 125 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 HMSDA8MTL9 139 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 BCL2L11O43521 198 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 IGLV2-11P01706 119 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 TCRAP04437 139 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 ATP5G1P05496 136 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 ATP5G3P48201 142 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 TCL1AP56279 114 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 DAZ2Q13117 558 aaKnown RBP5.01□□□□□ -1.61
UBE4B-209ENST00000487244 FAM74A1Q5RGS3 127 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 AKR1C8PQ5T2L2 129 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 LCE5AQ5TCM9 118 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 Q6AWC8 147 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 Q6ZNX1 250 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 C5orf17Q8NAS9 161 aa5.01□□□□□ -1.61
UBE4B-209ENST00000487244 ZNF680Q8NEM1 530 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms