RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 AGPAT4-IT1Q9H0P7 198 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 MS4A6AQ9H2W1 248 aa5.32□□□□□ -1.56
SF3A3-206ENST00000487062 ZMAT5Q9UDW3 170 aaKnown RBP5.32□□□□□ -1.56
SF3A3-206ENST00000487062 CSMD1Q96PZ7 3565 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 TRBV7-9A0A0J9YWB2 115 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 TMEM189A5PLL7 270 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 PCP4L1A6NKN8 68 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 HIGD1CA8MV81 97 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 SH2D1AO60880 128 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 CA1P00915 261 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-206ENST00000487062 MT-ND6P03923 174 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 CSN3P07498 182 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 PRB4P10163 310 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-206ENST00000487062 TFPI2P48307 235 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H1AQ02539 215 aaPredicted RBP5.31□□□□□ -1.56
SF3A3-206ENST00000487062 FHL3Q13643 280 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 Q6AWC8 147 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 ATP5L2Q7Z4Y8 100 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 ZFP82Q8N141 532 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 NUP35Q8NFH5 326 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 OR8A1Q8NGG7 326 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 BORCS7Q96B45 105 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 NEU1Q99519 415 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 GPR61Q9BZJ8 451 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 TRAPPC1Q9Y5R8 145 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 OTOGQ6ZRI0 2925 aa5.31□□□□□ -1.56
SF3A3-206ENST00000487062 TRAV25A0A0B4J276 109 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 DUSP14O95147 198 aaKnown RBP5.3□□□□□ -1.56
SF3A3-206ENST00000487062 HLA-DQA1P01909 254 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 CRIP1P50238 77 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 ACTL10Q5JWF8 245 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 EBLN2Q6P2I7 272 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 NDUFA11Q86Y39 141 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 FRZBQ92765 325 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 GNB1LQ9BYB4 327 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 SIGLEC8Q9NYZ4 499 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 SVEP1Q4LDE5 3571 aa5.3□□□□□ -1.56
SF3A3-206ENST00000487062 ZFHX3Q15911 3703 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 A0A1B0GW15 77 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 OR4C46A6NHA9 309 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 SNURFLB1AK76 121 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 UBE2CO00762 179 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 SPINK4O60575 86 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ORM1P02763 201 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 GPX1P07203 203 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ZNF688P0C7X2 276 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 TRGC1P0CF51 173 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ZNF705DP0CH99 300 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ZNF705BP0CI00 300 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-206ENST00000487062 FOXA3P55318 350 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-206ENST00000487062 RAB4BP61018 213 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 FABP9Q0Z7S8 132 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 RIGQ13278 110 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 NSUN5P1Q3KNT7 163 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 PSMG4Q5JS54 123 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 MRPL54Q6P161 138 aaKnown RBP5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ADAMTSL5Q6ZMM2 481 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 PGLYRP4Q96LB8 373 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ODF3Q96PU9 254 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 SPAG8Q99932 426 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-206ENST00000487062 SELENOKQ9Y6D0 94 aa5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ANK3Q12955 4377 aaKnown RBP5.29□□□□□ -1.56
SF3A3-206ENST00000487062 ZNF469Q96JG9 3925 aaPredicted RBP5.29□□□□□ -1.56
SF3A3-206ENST00000487062 TMSB15BA0A087X1C1 80 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 TRAV21A0A0B4J279 112 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 A0A0J9YX75 114 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 A0A1B0GUT8 65 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 C5orf52A6NGY3 159 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 F6UB75 175 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BKO60814 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BJP06899 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 GZMBP10144 247 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 CRISP2P16562 243 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BOP23527 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 TSPOP30536 169 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BBP33778 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 LEPP41159 167 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 ZNF80P51504 273 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-206ENST00000487062 CMC4P56277 68 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-206ENST00000487062 NDUFA6P56556 154 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BDP58876 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BCP62807 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HBBP68871 147 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST2H2BEQ16778 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 DEFB114Q30KQ6 69 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-206ENST00000487062 FOXI2Q6ZQN5 318 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 TMEM61Q8N0U2 210 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 GTSF1Q8WW33 167 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BHQ93079 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BNQ99877 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 HIST1H2BMQ99879 126 aa5.28□□□□□ -1.56
SF3A3-206ENST00000487062 A0A1B0GXF2 115 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 PHOX2AO14813 284 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 MALP21145 153 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 SNRPEP62304 92 aaKnown RBP5.27□□□□□ -1.57
SF3A3-206ENST00000487062 KIR3DS1Q14943 382 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 HIST2H2BDQ6DRA6 164 aa5.27□□□□□ -1.57
SF3A3-206ENST00000487062 TMEM136Q6ZRR5 245 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms