RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 FFAR4Q5NUL3 377 aa16.92■□□□□ 0.3
LIME1-206ENST00000487026 MARVELD1Q9BSK0 173 aa16.92■□□□□ 0.3
LIME1-206ENST00000487026 SMIM3Q9BZL3 60 aa16.92■□□□□ 0.3
LIME1-206ENST00000487026 SSNA1O43805 119 aa16.91■□□□□ 0.3
LIME1-206ENST00000487026 IBA57Q5T440 356 aaKnown RBP16.91■□□□□ 0.3
LIME1-206ENST00000487026 HSPB11Q9Y547 144 aa16.91■□□□□ 0.3
LIME1-206ENST00000487026 MPC2O95563 127 aa16.9■□□□□ 0.3
LIME1-206ENST00000487026 CSN1S1P47710 185 aa16.9■□□□□ 0.3
LIME1-206ENST00000487026 ARPC5LQ9BPX5 153 aa16.9■□□□□ 0.3
LIME1-206ENST00000487026 UBE2L3P68036 154 aaKnown RBP16.89■□□□□ 0.29
LIME1-206ENST00000487026 MUC21Q5SSG8 566 aa16.89■□□□□ 0.29
LIME1-206ENST00000487026 SPATA12Q7Z6I5 190 aa16.89■□□□□ 0.29
LIME1-206ENST00000487026 ST6GAL2Q96JF0 529 aa16.89■□□□□ 0.29
LIME1-206ENST00000487026 PAX4O43316 350 aa16.88■□□□□ 0.29
LIME1-206ENST00000487026 RPL12P30050 165 aaKnown RBP16.88■□□□□ 0.29
LIME1-206ENST00000487026 SCGB1C1Q8TD33 95 aa16.88■□□□□ 0.29
LIME1-206ENST00000487026 A0A1W2PPQ1 181 aa16.87■□□□□ 0.29
LIME1-206ENST00000487026 IFNA5P01569 189 aa16.87■□□□□ 0.29
LIME1-206ENST00000487026 LYPD1Q8N2G4 141 aa16.87■□□□□ 0.29
LIME1-206ENST00000487026 HYLS1Q96M11 299 aa16.87■□□□□ 0.29
LIME1-206ENST00000487026 TRBV7-9A0A0J9YWB2 115 aa16.86■□□□□ 0.29
LIME1-206ENST00000487026 RBAKDNA6NC62 111 aa16.86■□□□□ 0.29
LIME1-206ENST00000487026 ZNF266Q14584 549 aa16.86■□□□□ 0.29
LIME1-206ENST00000487026 C8orf49Q96NF6 230 aa16.86■□□□□ 0.29
LIME1-206ENST00000487026 WFDC1Q9HC57 220 aa16.86■□□□□ 0.29
LIME1-206ENST00000487026 MDFICQ9P1T7 246 aa16.86■□□□□ 0.29
LIME1-206ENST00000487026 ICOSQ9Y6W8 199 aa16.86■□□□□ 0.29
LIME1-206ENST00000487026 DNAH5Q8TE73 4624 aa16.85■□□□□ 0.29
LIME1-206ENST00000487026 DIRC3C9JPN6 131 aa16.85■□□□□ 0.29
LIME1-206ENST00000487026 ZNF415Q09FC8 603 aa16.85■□□□□ 0.29
LIME1-206ENST00000487026 FHL2Q14192 279 aa16.85■□□□□ 0.29
LIME1-206ENST00000487026 KHDC3LQ587J8 217 aa16.85■□□□□ 0.29
LIME1-206ENST00000487026 MBD2Q9UBB5 411 aa16.85■□□□□ 0.29
LIME1-206ENST00000487026 HHLA3Q9XRX5 114 aa16.85■□□□□ 0.29
LIME1-206ENST00000487026 PET100P0DJ07 73 aa16.84■□□□□ 0.29
LIME1-206ENST00000487026 PRO0255Q9UI72 69 aa16.84■□□□□ 0.29
LIME1-206ENST00000487026 CDK2AP2O75956 126 aa16.83■□□□□ 0.28
LIME1-206ENST00000487026 CRYBA4P53673 196 aa16.83■□□□□ 0.28
LIME1-206ENST00000487026 TAS2R45P59539 299 aa16.83■□□□□ 0.28
LIME1-206ENST00000487026 KRTAP10-2P60368 255 aa16.83■□□□□ 0.28
LIME1-206ENST00000487026 RPH3ALQ9UNE2 315 aa16.83■□□□□ 0.28
LIME1-206ENST00000487026 APOBP04114 4563 aaKnown RBP16.82■□□□□ 0.28
LIME1-206ENST00000487026 PGPA6NDG6 321 aa16.82■□□□□ 0.28
LIME1-206ENST00000487026 SIVA1O15304 175 aa16.82■□□□□ 0.28
LIME1-206ENST00000487026 NXPH4O95158 308 aa16.82■□□□□ 0.28
LIME1-206ENST00000487026 LINC00315P59091 139 aa16.82■□□□□ 0.28
LIME1-206ENST00000487026 TMEM183BQ1AE95 376 aa16.82■□□□□ 0.28
LIME1-206ENST00000487026 TMEM183AQ8IXX5 376 aa16.82■□□□□ 0.28
LIME1-206ENST00000487026 SFTA3P0C7M3 94 aa16.81■□□□□ 0.28
LIME1-206ENST00000487026 Q6AWC8 147 aa16.81■□□□□ 0.28
LIME1-206ENST00000487026 PTTG1O95997 202 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 SLAQ13239 276 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 LYPD5Q6UWN5 251 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 FAM159AQ6UWV7 190 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 MAPKAPK5-AS1Q8N8E1 139 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 ZNF479Q96JC4 524 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 OTORQ9NRC9 128 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 NAGKQ9UJ70 344 aa16.8■□□□□ 0.28
LIME1-206ENST00000487026 TRGV4A0A0C4DH28 118 aa16.79■□□□□ 0.28
LIME1-206ENST00000487026 HMGB3O15347 200 aaKnown RBP16.79■□□□□ 0.28
LIME1-206ENST00000487026 BTF3P20290 206 aaKnown RBP16.79■□□□□ 0.28
LIME1-206ENST00000487026 RAB2AP61019 212 aa16.79■□□□□ 0.28
LIME1-206ENST00000487026 LENEPQ9Y5L5 61 aa16.79■□□□□ 0.28
LIME1-206ENST00000487026 TNFRSF18Q9Y5U5 241 aa16.79■□□□□ 0.28
LIME1-206ENST00000487026 MRPL23Q16540 153 aaKnown RBP16.78■□□□□ 0.28
LIME1-206ENST00000487026 ACOT6Q3I5F7 207 aaPredicted RBP16.78■□□□□ 0.28
LIME1-206ENST00000487026 GOLT1AQ6ZVE7 132 aa16.78■□□□□ 0.28
LIME1-206ENST00000487026 CMTM2Q8TAZ6 248 aa16.78■□□□□ 0.28
LIME1-206ENST00000487026 A0A1W2PPV4 95 aa16.77■□□□□ 0.28
LIME1-206ENST00000487026 GNRH2O43555 120 aa16.77■□□□□ 0.28
LIME1-206ENST00000487026 RGS21Q2M5E4 152 aa16.77■□□□□ 0.28
LIME1-206ENST00000487026 Q6ZRN7 208 aaPredicted RBP16.77■□□□□ 0.28
LIME1-206ENST00000487026 SPXQ9BT56 116 aa16.77■□□□□ 0.28
LIME1-206ENST00000487026 TRGV11A0A075B6L2 103 aa16.76■□□□□ 0.27
LIME1-206ENST00000487026 TRAV8-1A0A0A6YYK1 113 aa16.76■□□□□ 0.27
LIME1-206ENST00000487026 TMED6Q8WW62 240 aa16.76■□□□□ 0.27
LIME1-206ENST00000487026 RASL10AQ92737 203 aa16.76■□□□□ 0.27
LIME1-206ENST00000487026 GNG5P63218 68 aa16.75■□□□□ 0.27
LIME1-206ENST00000487026 FAM74A1Q5RGS3 127 aa16.75■□□□□ 0.27
LIME1-206ENST00000487026 NEGR1Q7Z3B1 354 aa16.75■□□□□ 0.27
LIME1-206ENST00000487026 OR10G4Q8NGN3 311 aa16.75■□□□□ 0.27
LIME1-206ENST00000487026 OR10G9Q8NGN4 311 aa16.75■□□□□ 0.27
LIME1-206ENST00000487026 OR10G7Q8NGN6 311 aa16.75■□□□□ 0.27
LIME1-206ENST00000487026 TVP23CQ96ET8 276 aa16.75■□□□□ 0.27
LIME1-206ENST00000487026 F6UZH7 168 aa16.74■□□□□ 0.27
LIME1-206ENST00000487026 K7EQD1 137 aa16.74■□□□□ 0.27
LIME1-206ENST00000487026 PQLC2Q6ZP29 291 aa16.74■□□□□ 0.27
LIME1-206ENST00000487026 IQCF2Q8IXL9 164 aa16.74■□□□□ 0.27
LIME1-206ENST00000487026 ALG5Q9Y673 324 aa16.74■□□□□ 0.27
LIME1-206ENST00000487026 GYPEP15421 78 aa16.73■□□□□ 0.27
LIME1-206ENST00000487026 FUSP35637 526 aaKnown RBP eCLIP16.73■□□□□ 0.27
LIME1-206ENST00000487026 SGK494Q96LW2 274 aa16.73■□□□□ 0.27
LIME1-206ENST00000487026 IGHV3-16A0A0C4DH30 117 aa16.72■□□□□ 0.27
LIME1-206ENST00000487026 SRIP30626 198 aa16.72■□□□□ 0.27
LIME1-206ENST00000487026 TDRG1Q3Y452 100 aa16.72■□□□□ 0.27
LIME1-206ENST00000487026 TREM1Q9NP99 234 aa16.72■□□□□ 0.27
LIME1-206ENST00000487026 TRAV21A0A0B4J279 112 aa16.7■□□□□ 0.26
LIME1-206ENST00000487026 TYMSP04818 313 aa16.7■□□□□ 0.26
LIME1-206ENST00000487026 ARL14EPLP0DKL9 152 aa16.7■□□□□ 0.26
LIME1-206ENST00000487026 WFDC10BQ8IUB3 73 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms