RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
HMGN1-216ENST00000486741 DEFB1P60022 68 aa10.35□□□□□ -0.75
HMGN1-216ENST00000486741 RNASE8Q8TDE3 154 aaKnown RBP10.35□□□□□ -0.75
HMGN1-216ENST00000486741 LTAP01374 205 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 IGF2BP2-AS1Q96M15 143 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 MRPL27Q9P0M9 148 aaKnown RBP10.34□□□□□ -0.75
HMGN1-216ENST00000486741 ZNF492Q9P255 531 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 HBDP02042 147 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 DSCR9P59020 149 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 GAGE12BA1L429 117 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 TSPOP30536 169 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 LMO4P61968 165 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 DEFB112Q30KQ8 113 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 C9orf139Q6ZV77 190 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 SYT8Q8NBV8 401 aa10.34□□□□□ -0.75
HMGN1-216ENST00000486741 NDUFA3O95167 84 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 CRYGCP07315 174 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 TDRG1Q3Y452 100 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 OCIAD2Q56VL3 154 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 Q96MF0 132 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 CST9LQ9H4G1 147 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 IFI27L1Q96BM0 104 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 SIRPDQ9H106 197 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 FAM223BA6NKX1 122 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 SLC25A16P16260 332 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 FAM223AQ8IWN6 122 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 ORAOV1Q8WV07 137 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 CHCHD1Q96BP2 118 aaKnown RBP10.33□□□□□ -0.76
HMGN1-216ENST00000486741 USMG5Q96IX5 58 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 DAZ1Q9NQZ3 744 aaKnown RBP10.33□□□□□ -0.76
HMGN1-216ENST00000486741 DNLZQ5SXM8 178 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 LINC00322Q6ZN03 302 aaPredicted RBP10.33□□□□□ -0.76
HMGN1-216ENST00000486741 LY6G5BQ8NDX9 201 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 DUX3Q96PT4 197 aa10.33□□□□□ -0.76
HMGN1-216ENST00000486741 A0A1W2PPR1 153 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 PRSS57Q6UWY2 283 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 RAX2Q96IS3 184 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 KIR2DL4Q99706 377 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 SIGMAR1Q99720 223 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 OVOL1O14753 267 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 COX11Q9Y6N1 276 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 PRAC2D3DTV9 90 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 INS-IGF2F8WCM5 200 aa10.32□□□□□ -0.76
HMGN1-216ENST00000486741 EGR2P11161 476 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-216ENST00000486741 TRAV26-2A0A0B4J265 109 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 SYS1-DBNDD2H3BUS1 97 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 STPG4Q8N801 248 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 OR2K2Q8NGT1 345 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 GTSF1Q8WW33 167 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 CFHR4Q92496 578 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 C10orf105Q8TEF2 133 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 AGPAT4-IT1Q9H0P7 198 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 LINC01587Q99440 93 aa10.31□□□□□ -0.76
HMGN1-216ENST00000486741 A0A087WWL8 130 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 A0A1B0GWB2 263 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 PSMB2P49721 201 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 MSRB1Q9NZV6 116 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 IGLV2-8P01709 118 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 GFRA4Q9GZZ7 299 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 TET2Q6N021 2002 aaPredicted RBP10.3□□□□□ -0.76
HMGN1-216ENST00000486741 GAGE1Q13065 139 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 CT83Q5H943 113 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 YPEL4Q96NS1 127 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 PRORYQ9H606 182 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 FOXE3Q13461 319 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 OR1N2Q8NGR9 330 aa10.3□□□□□ -0.76
HMGN1-216ENST00000486741 TRBV12-3P01733 135 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 TMEM170BQ5T4T1 132 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 SFTA2Q6UW10 78 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 C5orf56Q8N8D9 126 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 TMEM8BA6NDV4 472 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 PPBPP02775 128 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 RPL13AP40429 203 aaKnown RBP10.29□□□□□ -0.76
HMGN1-216ENST00000486741 EMP1P54849 157 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 DEFB136Q30KP8 78 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 MRPL51Q4U2R6 128 aaKnown RBP10.29□□□□□ -0.76
HMGN1-216ENST00000486741 COA6Q5JTJ3 125 aaKnown RBP10.29□□□□□ -0.76
HMGN1-216ENST00000486741 C11orf71Q6IPW1 123 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
HMGN1-216ENST00000486741 CRYGBP07316 175 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 LINC00477Q96M19 166 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 C20orf144Q9BQM9 153 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 NXT2Q9NPJ8 142 aaKnown RBP10.28□□□□□ -0.76
HMGN1-216ENST00000486741 DOPEY1Q5JWR5 2465 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 A0A087X0K7 114 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-216ENST00000486741 HERVK_113P61574 105 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 SPINK13Q1W4C9 94 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 HIST1H4GQ99525 98 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 IGHV1-24A0A0C4DH33 117 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 ODF3BA8MYP8 253 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 HOXA3O43365 443 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-216ENST00000486741 BUB3O43684 328 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 PAX1P15863 534 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 TTC32Q5I0X7 151 aa10.28□□□□□ -0.76
HMGN1-216ENST00000486741 LINC00173Q6ZV60 143 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms