RNA–Protein interactions for RNA: ENST00000486361.5

LIMK1-206, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 569 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-206ENST00000486361 TVP23CQ96ET8 276 aa14.02□□□□□ -0.17
LIMK1-206ENST00000486361 MAP1LC3BQ9GZQ8 125 aa14.02□□□□□ -0.17
LIMK1-206ENST00000486361 TRBV7-9A0A0J9YWB2 115 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 RGS13O14921 159 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 TCRAP04437 139 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 SEC11BP0C7V7 166 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 EIF4E3Q8N5X7 224 aaKnown RBP14.01□□□□□ -0.17
LIMK1-206ENST00000486361 ARL6IP6Q8N6S5 226 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 C5orf17Q8NAS9 161 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 EPDR1Q9UM22 224 aa14.01□□□□□ -0.17
LIMK1-206ENST00000486361 IGHV1OR15-1A0A075B7D0 117 aa14□□□□□ -0.17
LIMK1-206ENST00000486361 SNURFLB1AK76 121 aa14□□□□□ -0.17
LIMK1-206ENST00000486361 MUC21Q5SSG8 566 aa14□□□□□ -0.17
LIMK1-206ENST00000486361 FAM213BQ8TBF2 198 aa14□□□□□ -0.17
LIMK1-206ENST00000486361 TMED6Q8WW62 240 aa14□□□□□ -0.17
LIMK1-206ENST00000486361 HYDINQ4G0P3 5121 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 A0A1B0GV50 99 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 A0A1W2PRE2 83 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 F6UZH7 168 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 TCTAP57738 103 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 C11orf72Q8NBR9 251 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 LINC00467Q9BRT7 94 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 LENEPQ9Y5L5 61 aa13.99□□□□□ -0.17
LIMK1-206ENST00000486361 A0A1B0GVG6 124 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 GAGE12BA1L429 117 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 GAGE7O76087 117 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 C1QBP02746 253 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 GAGE12FP0CL80 117 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 GAGE12GP0CL81 117 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 GAGE12IP0CL82 117 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 ANXA2RQ3ZCQ2 193 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 LGALS9CQ6DKI2 356 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 AKAP14Q86UN6 197 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 LINC00479Q96M42 142 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 NDUFAF3Q9BU61 184 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 TREM1Q9NP99 234 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 KLF12Q9Y4X4 402 aa13.98□□□□□ -0.17
LIMK1-206ENST00000486361 FAM74A7A6NL05 159 aa13.97□□□□□ -0.17
LIMK1-206ENST00000486361 IFNA7P01567 189 aa13.97□□□□□ -0.17
LIMK1-206ENST00000486361 TPT1P13693 172 aaKnown RBP13.97□□□□□ -0.17
LIMK1-206ENST00000486361 EIF5AP63241 154 aaKnown RBP13.97□□□□□ -0.17
LIMK1-206ENST00000486361 Q6AWC8 147 aa13.97□□□□□ -0.17
LIMK1-206ENST00000486361 TMEM88Q6PEY1 159 aa13.97□□□□□ -0.17
LIMK1-206ENST00000486361 SFT2D1Q8WV19 159 aa13.97□□□□□ -0.17
LIMK1-206ENST00000486361 C8orf49Q96NF6 230 aa13.97□□□□□ -0.17
LIMK1-206ENST00000486361 PSG8Q9UQ74 426 aa13.97□□□□□ -0.17
LIMK1-206ENST00000486361 TRAV34A0A0B4J273 112 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 UMAD1C9J7I0 102 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 F5H768 121 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 IGLV2-11P01706 119 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 Q6ZTI0 123 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 PRNTQ86SH4 94 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 ZNF680Q8NEM1 530 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 STOML3Q8TAV4 291 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 NAGKQ9UJ70 344 aa13.96□□□□□ -0.17
LIMK1-206ENST00000486361 SERTM2A0A1B0GWG4 89 aa13.95□□□□□ -0.18
LIMK1-206ENST00000486361 K7EQM0 130 aa13.95□□□□□ -0.18
LIMK1-206ENST00000486361 ATP5G1P05496 136 aa13.95□□□□□ -0.18
LIMK1-206ENST00000486361 ATP5G3P48201 142 aa13.95□□□□□ -0.18
LIMK1-206ENST00000486361 FLI1Q01543 452 aaPredicted RBP13.95□□□□□ -0.18
LIMK1-206ENST00000486361 LINC00612Q8N6U2 182 aa13.95□□□□□ -0.18
LIMK1-206ENST00000486361 CYB561D1Q8N8Q1 229 aa13.95□□□□□ -0.18
LIMK1-206ENST00000486361 MBD3L1Q8WWY6 194 aa13.95□□□□□ -0.18
LIMK1-206ENST00000486361 DAZ2Q13117 558 aaKnown RBP13.94□□□□□ -0.18
LIMK1-206ENST00000486361 ATG101Q9BSB4 218 aa13.94□□□□□ -0.18
LIMK1-206ENST00000486361 TRGV1A0A0A0MS02 117 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 ZNF80P51504 273 aaPredicted RBP13.93□□□□□ -0.18
LIMK1-206ENST00000486361 TCL1AP56279 114 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 TMEM183BQ1AE95 376 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 CST9LP1Q5W188 147 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 FAM159AQ6UWV7 190 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 TMEM183AQ8IXX5 376 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 NDFIP1Q9BT67 221 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 MDFICQ9P1T7 246 aa13.93□□□□□ -0.18
LIMK1-206ENST00000486361 TRAV21A0A0B4J279 112 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 PEX7O00628 323 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 GNRH2O43555 120 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 PAGE4O60829 102 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 H2AFB1P0C5Y9 115 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 DPPA3Q6W0C5 159 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 TMEM75Q8N9X5 138 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 FAM210BQ96KR6 192 aa13.92□□□□□ -0.18
LIMK1-206ENST00000486361 SPINK4O60575 86 aa13.91□□□□□ -0.18
LIMK1-206ENST00000486361 OR5I1Q13606 314 aa13.91□□□□□ -0.18
LIMK1-206ENST00000486361 IBA57Q5T440 356 aaKnown RBP13.91□□□□□ -0.18
LIMK1-206ENST00000486361 NKX6-2Q9C056 277 aaPredicted RBP13.91□□□□□ -0.18
LIMK1-206ENST00000486361 MRPL16Q9NX20 251 aaKnown RBP13.91□□□□□ -0.18
LIMK1-206ENST00000486361 GCGP01275 180 aa13.9□□□□□ -0.18
LIMK1-206ENST00000486361 HOXA5P20719 270 aa13.9□□□□□ -0.18
LIMK1-206ENST00000486361 ZNF415Q09FC8 603 aa13.9□□□□□ -0.18
LIMK1-206ENST00000486361 C9orf62Q8N4C0 152 aa13.9□□□□□ -0.18
LIMK1-206ENST00000486361 VPS13DQ5THJ4 4388 aa13.89□□□□□ -0.19
LIMK1-206ENST00000486361 TRGV2A0A075B6R0 118 aa13.89□□□□□ -0.19
LIMK1-206ENST00000486361 CCL20P78556 96 aa13.89□□□□□ -0.19
LIMK1-206ENST00000486361 SLC51BQ86UW2 128 aa13.89□□□□□ -0.19
LIMK1-206ENST00000486361 HIST1H2BAQ96A08 127 aa13.89□□□□□ -0.19
LIMK1-206ENST00000486361 C11orf21Q9P2W6 132 aa13.89□□□□□ -0.19
LIMK1-206ENST00000486361 ARL2-SNX15V9GYD0 113 aa13.89□□□□□ -0.19
LIMK1-206ENST00000486361 ZFP69Q49AA0 526 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms