RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 A0A1B0GVG6 124 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 A0A1W2PPV4 95 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 SNURFLB1AK76 121 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 OR7C2O60412 319 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 MBP02144 154 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 GPX1P07203 203 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 OR10J4P0C629 311 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 HTN1P15515 57 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 RANP62826 216 aaKnown RBP4.91□□□□□ -1.62
VPS50-218ENST00000485994 FAM74A1Q5RGS3 127 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 TMEM88Q6PEY1 159 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 Q6ZR54 194 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 EIF4E3Q8N5X7 224 aaKnown RBP4.91□□□□□ -1.62
VPS50-218ENST00000485994 C11orf72Q8NBR9 251 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 OR10G4Q8NGN3 311 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 OR10G9Q8NGN4 311 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 OR10G7Q8NGN6 311 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 ST6GAL2Q96JF0 529 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 VGLL1Q99990 258 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 Q9H3A6 140 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 TNFSF18Q9UNG2 199 aa4.91□□□□□ -1.62
VPS50-218ENST00000485994 FAT2Q9NYQ8 4349 aa4.9□□□□□ -1.62
VPS50-218ENST00000485994 SERTM2A0A1B0GWG4 89 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 RNF222A6NCQ9 220 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 PGPA6NDG6 321 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 F5H768 121 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 SMLR1H3BR10 107 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 SPINK4O60575 86 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 STAG3L2P0CL84 134 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 STAG3L3P0CL85 134 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 CD300CQ08708 224 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 Q6AWC8 147 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 FAM122CQ6P4D5 195 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 OR11H4Q8NGC9 324 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 PHYHIPLQ96FC7 376 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 SMIM3Q9BZL3 60 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 OTORQ9NRC9 128 aa4.9□□□□□ -1.63
VPS50-218ENST00000485994 IGHV1OR15-1A0A075B7D0 117 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 IGKV2-40A0A087WW87 121 aaPredicted RBP4.89□□□□□ -1.63
VPS50-218ENST00000485994 TAAR5O14804 337 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 IGKV2D-40P01614 121 aaPredicted RBP4.89□□□□□ -1.63
VPS50-218ENST00000485994 PRB4P10163 310 aaPredicted RBP4.89□□□□□ -1.63
VPS50-218ENST00000485994 HTN3P15516 51 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 ATP6V0CP27449 155 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 RNASE4P34096 147 aaKnown RBP4.89□□□□□ -1.63
VPS50-218ENST00000485994 TCL1AP56279 114 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 UBE2L3P68036 154 aaKnown RBP4.89□□□□□ -1.63
VPS50-218ENST00000485994 SLAQ13239 276 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 TDRG1Q3Y452 100 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 IQCF2Q8IXL9 164 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 INO80EQ8NBZ0 244 aaPredicted RBP4.89□□□□□ -1.63
VPS50-218ENST00000485994 OR2T35Q8NGX2 323 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 CMTM2Q8TAZ6 248 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 GNPNAT1Q96EK6 184 aaPredicted RBP4.89□□□□□ -1.63
VPS50-218ENST00000485994 KRTAP9-8Q9BYQ0 159 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 KLF12Q9Y4X4 402 aa4.89□□□□□ -1.63
VPS50-218ENST00000485994 BORCS7-ASMTA0A0B4J1R7 106 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 FBLL1A6NHQ2 334 aaKnown RBP4.88□□□□□ -1.63
VPS50-218ENST00000485994 RGS13O14921 159 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 BTF3P20290 206 aaKnown RBP4.88□□□□□ -1.63
VPS50-218ENST00000485994 CDC34P49427 236 aaPredicted RBP4.88□□□□□ -1.63
VPS50-218ENST00000485994 CCL18P55774 89 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 RAB2AP61019 212 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 BTN1A1Q13410 526 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 KRTAP19-4Q3LI73 84 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 RASL10AQ92737 203 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 RAB24Q969Q5 203 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 SPXQ9BT56 116 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 GSN-AS1Q9NRJ2 163 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 TMEM167BQ9NRX6 74 aa4.88□□□□□ -1.63
VPS50-218ENST00000485994 hCG_2014768A0A024R1R8 64 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 A0A1B0GVY2 172 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 A0A1W2PRE2 83 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 GAGE12BA1L429 117 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 J3KRW8 73 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 RTL8CO15255 209 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 GAGE7O76087 117 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 CXorf1O96002 111 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 GAGE12FP0CL80 117 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 GAGE12GP0CL81 117 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 GAGE12IP0CL82 117 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 HOXA5P20719 270 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 OR5I1Q13606 314 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 PRR9Q5T870 116 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 Q6ZTI0 123 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 UBE2DNLQ8IWF7 75 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 TCTE3Q8IZS6 198 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 HSD17B11Q8NBQ5 300 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 ZNRF2Q8NHG8 242 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 ATG101Q9BSB4 218 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 UPK3BQ9BT76 320 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 NKX6-2Q9C056 277 aaPredicted RBP4.87□□□□□ -1.63
VPS50-218ENST00000485994 ACTR3CQ9C0K3 210 aaPredicted RBP4.87□□□□□ -1.63
VPS50-218ENST00000485994 CYTL1Q9NRR1 136 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 LINC00588Q9Y4M8 146 aa4.87□□□□□ -1.63
VPS50-218ENST00000485994 TRGV11A0A075B6L2 103 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 TRGV2A0A075B6R0 118 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 TRAV26-1A0A087WT03 109 aa4.86□□□□□ -1.63
VPS50-218ENST00000485994 FXYD6-FXYD2A0A087WZ82 144 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms