RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 H3BRN7 92 aa8.4□□□□□ -1.06
SRGAP3-207ENST00000485983 IGLV1-44P01699 117 aa8.4□□□□□ -1.06
SRGAP3-207ENST00000485983 KIAA2026Q5HYC2 2103 aa8.4□□□□□ -1.06
SRGAP3-207ENST00000485983 PYGO2Q9BRQ0 406 aa8.4□□□□□ -1.06
SRGAP3-207ENST00000485983 KAAG1Q9UBP8 84 aa8.4□□□□□ -1.06
SRGAP3-207ENST00000485983 TRAV13-2A0A0B4J235 113 aa8.4□□□□□ -1.06
SRGAP3-207ENST00000485983 ICOSQ9Y6W8 199 aa8.4□□□□□ -1.06
SRGAP3-207ENST00000485983 hADV29S1A0JD25 119 aa8.4□□□□□ -1.07
SRGAP3-207ENST00000485983 BUB3O43684 328 aa8.4□□□□□ -1.07
SRGAP3-207ENST00000485983 ATP5G1P05496 136 aa8.4□□□□□ -1.07
SRGAP3-207ENST00000485983 HIST3H2BBQ8N257 126 aa8.4□□□□□ -1.07
SRGAP3-207ENST00000485983 C4orf48Q5BLP8 95 aa8.4□□□□□ -1.07
SRGAP3-207ENST00000485983 U3KQE9 123 aa8.4□□□□□ -1.07
SRGAP3-207ENST00000485983 XCL1P47992 114 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 FOXE3Q13461 319 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 KIR3DS1Q14943 382 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 TMEM14CQ9P0S9 112 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 PTPRQQ9UMZ3 2332 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 DUX4L9Q6RFH8 374 aaPredicted RBP8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 ETDCA0A1B0GVM5 59 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 STPG4Q8N801 248 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 Q6ZQT7 251 aa8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 YLPM1P49750 1951 aaKnown RBP8.39□□□□□ -1.07
SRGAP3-207ENST00000485983 LY6G6EA0A0G2JKS1 128 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 NDUFS7O75251 213 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 RPL18AQ02543 176 aaKnown RBP8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 IL17DQ8TAD2 202 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 U3KQA8 63 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 TIRAPP58753 221 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 MPDZO75970 2070 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 UBE2CO00762 179 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 HOXB4P17483 251 aaPredicted RBP8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 SLX1AQ9BQ83 275 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 ANK1P16157 1881 aa8.38□□□□□ -1.07
SRGAP3-207ENST00000485983 DEFB136Q30KP8 78 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 MPV17L2Q567V2 206 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 TM2D2Q9BX73 214 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 IGKV1-6A0A0C4DH72 117 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 CFPP27918 469 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 CAMK2N2Q96S95 79 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 DOCK8Q8NF50 2099 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 IGHV4-61A0A0C4DH41 118 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 Q6ZWC4 215 aa8.37□□□□□ -1.07
SRGAP3-207ENST00000485983 ETV2O00321 342 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 WT1-ASQ06250 92 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 TPSG1Q9NRR2 321 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 RLFQ13129 1914 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 TRBV20-1A0A075B6N2 111 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 IGHV4-30-2A0A087WSY4 118 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 TRAV26-2A0A0B4J265 109 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 F8W735 103 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 CRYGCP07315 174 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 DEFB105AQ8NG35 78 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 VOPP1Q96AW1 172 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 C16orf74Q96GX8 76 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 IGHV2-70P01814 119 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 PROK2Q9HC23 129 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 SHISA9B4DS77 424 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 WIPF2Q8TF74 440 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 UTF1Q5T230 341 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 PRSS57Q6UWY2 283 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 CFHR4Q92496 578 aa8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 CITED2Q99967 270 aaPredicted RBP8.36□□□□□ -1.07
SRGAP3-207ENST00000485983 K7EM74 188 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 IGHG4P01861 327 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 IGLC1P0CG04 106 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 C20orf78Q9BR46 151 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 CENPVL3A0A0U1RRI6 287 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 GYPEP15421 78 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 SLURP1P55000 103 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 MORN5Q5VZ52 161 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 RNF152Q8N8N0 203 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 ATP6V0E2Q8NHE4 81 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 SPINK8P0C7L1 97 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 GRNP28799 593 aaKnown RBP8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 PLA2G5P39877 138 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 SMAD5-AS1Q9Y6J3 95 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 UTRNP46939 3433 aa8.35□□□□□ -1.07
SRGAP3-207ENST00000485983 COLCA2A8K830 154 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 WDR86Q86TI4 376 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 APRG1Q8IVJ8 170 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 BOD1L2Q8IYS8 172 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 OR11H6Q8NGC7 330 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 FAM208BQ5VWN6 2430 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 THSD7BQ9C0I4 1608 aa8.34□□□□□ -1.07
SRGAP3-207ENST00000485983 C15orf65H3BRN8 121 aa8.34□□□□□ -1.08
SRGAP3-207ENST00000485983 IGHV3-30P01768 117 aa8.34□□□□□ -1.08
SRGAP3-207ENST00000485983 IGHV3-33P01772 117 aa8.34□□□□□ -1.08
SRGAP3-207ENST00000485983 IGHV3-30-3P0DP02 117 aa8.34□□□□□ -1.08
SRGAP3-207ENST00000485983 IGHV3-30-5P0DP03 117 aa8.34□□□□□ -1.08
SRGAP3-207ENST00000485983 SIGLEC8Q9NYZ4 499 aa8.34□□□□□ -1.08
SRGAP3-207ENST00000485983 ZNF407Q9C0G0 2248 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 MYCNOSP40205 109 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 DIAPH2-AS1Q14236 149 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 C8orf31Q8N9H6 132 aa8.33□□□□□ -1.08
SRGAP3-207ENST00000485983 NDUFB1O75438 58 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms