RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 A8MWL6 223 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 SAP30O75446 220 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 RAB5AP20339 215 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 RPS10P46783 165 aaKnown RBP7.16□□□□□ -1.26
CTSA-208ENST00000485627 FAM3BP58499 235 aaPredicted RBP7.16□□□□□ -1.26
CTSA-208ENST00000485627 FAM162BQ5T6X4 162 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 OR2D3Q8NGH3 330 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 ASCL2Q99929 193 aa7.16□□□□□ -1.26
CTSA-208ENST00000485627 SPAG8Q99932 426 aaPredicted RBP7.16□□□□□ -1.26
CTSA-208ENST00000485627 FABP5P3A8MUU1 101 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 DUSP14O95147 198 aaKnown RBP7.15□□□□□ -1.26
CTSA-208ENST00000485627 CXCL1P09341 107 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 ZNF705DP0CH99 300 aaPredicted RBP7.15□□□□□ -1.26
CTSA-208ENST00000485627 ZNF705BP0CI00 300 aaPredicted RBP7.15□□□□□ -1.26
CTSA-208ENST00000485627 TCL1AP56279 114 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 CD300EQ496F6 205 aaPredicted RBP7.15□□□□□ -1.26
CTSA-208ENST00000485627 CT83Q5H943 113 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 LINC00322Q6ZN03 302 aaPredicted RBP7.15□□□□□ -1.26
CTSA-208ENST00000485627 COX8CQ7Z4L0 72 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 TMEM61Q8N0U2 210 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 TSKUQ8WUA8 353 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 YPEL4Q96NS1 127 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 GPR61Q9BZJ8 451 aa7.15□□□□□ -1.26
CTSA-208ENST00000485627 SMIM27A0A1W2PRY6 76 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 TMEM189A5PLL7 270 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 C1orf196B1AJZ1 125 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 F6UB75 175 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 LCE2BO14633 110 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 SH2D1AO60880 128 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 CA1P00915 261 aaPredicted RBP7.14□□□□□ -1.27
CTSA-208ENST00000485627 RPS20P60866 119 aaKnown RBP7.14□□□□□ -1.27
CTSA-208ENST00000485627 C12orf54Q6X4T0 127 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 FOXI2Q6ZQN5 318 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 OR2K2Q8NGT1 345 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 NAT8BQ9UHF3 227 aa7.14□□□□□ -1.27
CTSA-208ENST00000485627 TRBV7-9A0A0J9YWB2 115 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 A0A0J9YX75 114 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 IZUMO1RA6ND01 250 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 ORM1P02763 201 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 GPX1P07203 203 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 LEPP41159 167 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 CRIP1P50238 77 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 CMC4P56277 68 aaPredicted RBP7.13□□□□□ -1.27
CTSA-208ENST00000485627 DEFB131AP59861 70 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 DEFB1P60022 68 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 CITED1Q99966 193 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 PYGO2Q9BRQ0 406 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 GFRA4Q9GZZ7 299 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 SRD5A3Q9H8P0 318 aa7.13□□□□□ -1.27
CTSA-208ENST00000485627 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 TRAV21A0A0B4J279 112 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 FAM231BA6NCW3 169 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 J3KRW8 73 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 TSPOP30536 169 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 RAB5BP61020 215 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 COX19Q49B96 90 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 Q6AWC8 147 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 LINC00482Q8N8I6 264 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 BORCS7Q96B45 105 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 ODF3Q96PU9 254 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 NEU1Q99519 415 aa7.12□□□□□ -1.27
CTSA-208ENST00000485627 SAV1Q9H4B6 383 aaPredicted RBP7.12□□□□□ -1.27
CTSA-208ENST00000485627 TMSB15BA0A087X1C1 80 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 HIGD1CA8MV81 97 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 SPINK4O60575 86 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 IGKV3-20P01619 116 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 TYMSP04818 313 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 RNASE4P34096 147 aaKnown RBP7.11□□□□□ -1.27
CTSA-208ENST00000485627 ZNF80P51504 273 aaPredicted RBP7.11□□□□□ -1.27
CTSA-208ENST00000485627 MRPL54Q6P161 138 aaKnown RBP7.11□□□□□ -1.27
CTSA-208ENST00000485627 WDR73Q6P4I2 378 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 NUP35Q8NFH5 326 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 PGLYRP4Q96LB8 373 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 TPPP3Q9BW30 176 aa7.11□□□□□ -1.27
CTSA-208ENST00000485627 KNCNA6PVL3 124 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 OR11H12B2RN74 326 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 IGLV1-51P01701 117 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 GZMBP10144 247 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 CRISP2P16562 243 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 INSL3P51460 131 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 RAB4BP61018 213 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 DEFA6Q01524 100 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 C21orf62-AS1Q17RA5 79 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 ACTL10Q5JWF8 245 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 C9orf66Q5T8R8 295 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 GDF5OSQ5U4N7 250 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 ZFAND2AQ8N6M9 145 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 C3orf56Q8N813 242 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 FRZBQ92765 325 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 MCRIP2Q9BUT9 160 aaKnown RBP7.1□□□□□ -1.27
CTSA-208ENST00000485627 MAP6D1Q9H9H5 199 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 ZNF256Q9Y2P7 627 aaPredicted RBP7.1□□□□□ -1.27
CTSA-208ENST00000485627 TRAPPC1Q9Y5R8 145 aa7.1□□□□□ -1.27
CTSA-208ENST00000485627 TRGC2P03986 189 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 HLA-DRB4P13762 266 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 CDKN1BP46527 198 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 RIGQ13278 110 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 RASL11AQ6T310 242 aa7.09□□□□□ -1.27
CTSA-208ENST00000485627 ATP5L2Q7Z4Y8 100 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms