RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 KLLNB2CW77 178 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 BTN1A1Q13410 526 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 ICAM4Q14773 271 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 IBA57Q5T440 356 aaKnown RBP9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 FAM167A-AS1Q96KT0 104 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 LINC00477Q96M19 166 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 PRO0255Q9UI72 69 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 KLF12Q9Y4X4 402 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
SMARCD3-211ENST00000485592 FXYD6-FXYD2A0A087WZ82 144 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 RGS13O14921 159 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 IGHV3-53P01767 116 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 ERCC8Q13216 396 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 MIR17HGQ75NE6 70 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 ARPC5LQ9BPX5 153 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 SLC25A2Q9BXI2 301 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 PRELID1Q9Y255 219 aa9.36□□□□□ -0.91
SMARCD3-211ENST00000485592 TRBV19A0A075B6N1 114 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 K7EP13 123 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 M0R3E3 92 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 GPX1P07203 203 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 RNASE4P34096 147 aaKnown RBP9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 CRYBA4P53673 196 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 KRTAP10-1P60331 282 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 CD300CQ08708 224 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 LYPD5Q6UWN5 251 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 Q6ZNX1 250 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 NEGR1Q7Z3B1 354 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 VGLL1Q99990 258 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 KCNIP2Q9NS61 270 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 MRPL16Q9NX20 251 aaKnown RBP9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 HHLA3Q9XRX5 114 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 TIMM9Q9Y5J7 89 aa9.35□□□□□ -0.91
SMARCD3-211ENST00000485592 PYYP10082 97 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 GCSHP23434 173 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 PDE6HQ13956 83 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 FFAR4Q5NUL3 377 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 OR11H4Q8NGC9 324 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 FAM19A4Q96LR4 140 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 C8orf49Q96NF6 230 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 AGPAT4-IT1Q9H0P7 198 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 AAMDCQ9H7C9 122 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 MSRB1Q9NZV6 116 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 TMEM14CQ9P0S9 112 aa9.34□□□□□ -0.91
SMARCD3-211ENST00000485592 C17orf112F2Z3M2 114 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 ARPC5O15511 151 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 NDUFB4O95168 129 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 SMR3BP02814 79 aaPredicted RBP9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 NMBP08949 121 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 HIST1H1EP10412 219 aaKnown RBP9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 CRISP2P16562 243 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 EVI2AP22794 236 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 SRIP30626 198 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 ZNF415Q09FC8 603 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 ZNF266Q14584 549 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 TMEM78Q5T7P6 136 aa9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 PCNPQ8WW12 178 aaKnown RBP9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 MRPL32Q9BYC8 188 aaKnown RBP9.33□□□□□ -0.92
SMARCD3-211ENST00000485592 DMBT1Q9UGM3 2413 aaPredicted RBP9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 IGHV1OR15-1A0A075B7D0 117 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 TRGV4A0A0C4DH28 118 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 EIF3GO75821 320 aaKnown RBP eCLIP9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 ATP6V0CP27449 155 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 RAB2AP61019 212 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 FHL2Q14192 279 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 RPL7L1Q6DKI1 246 aaKnown RBP9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 C9orf47Q6ZRZ4 202 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 HSD17B11Q8NBQ5 300 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 INO80EQ8NBZ0 244 aaPredicted RBP9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 OR2G3Q8NGZ4 309 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 FXYD5Q96DB9 178 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 SH3BGRL3Q9H299 93 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 TP53TG3Q9ULZ0 132 aa9.32□□□□□ -0.92
SMARCD3-211ENST00000485592 IGKV2-40A0A087WW87 121 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 K7EQD1 137 aa9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 IGKV2D-40P01614 121 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 Q6ZSN1 163 aa9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 EXOC3-AS1Q8N2X6 119 aa9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 PSMG3Q9BT73 122 aaPredicted RBP9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 CYTL1Q9NRR1 136 aa9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 MDFICQ9P1T7 246 aa9.31□□□□□ -0.92
SMARCD3-211ENST00000485592 ZNF345Q14585 488 aa9.3□□□□□ -0.92
SMARCD3-211ENST00000485592 PRR9Q5T870 116 aa9.3□□□□□ -0.92
SMARCD3-211ENST00000485592 FAM122CQ6P4D5 195 aa9.3□□□□□ -0.92
SMARCD3-211ENST00000485592 C10orf126Q8N4M7 172 aa9.3□□□□□ -0.92
SMARCD3-211ENST00000485592 ZFAND2AQ8N6M9 145 aa9.3□□□□□ -0.92
SMARCD3-211ENST00000485592 FAT1Q14517 4588 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 PSCAO43653 123 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 ORM1P02763 201 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 OR10J4P0C629 311 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 PHYHIPLQ96FC7 376 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 TXNDC17Q9BRA2 123 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms