RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 MPDU1O75352 247 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 OR10J4P0C629 311 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 PDE6HQ13956 83 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 TMEM78Q5T7P6 136 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 C9orf47Q6ZRZ4 202 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 ZNF680Q8NEM1 530 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 ENKURQ8TC29 256 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 ZNF503Q96F45 646 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 FAM19A4Q96LR4 140 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 SLC25A31Q9H0C2 315 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 OR51M1Q9H341 326 aa7.29□□□□□ -1.24
HMGN1-215ENST00000485550 A0A096LPF7 62 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 E5RGE8 158 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 RGS13O14921 159 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGN1-215ENST00000485550 ASAH1Q13510 395 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 ANXA2RQ3ZCQ2 193 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 TTC32Q5I0X7 151 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 Q5VSD8 79 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 ZFAND2AQ8N6M9 145 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 Q8TAT8 98 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 PAXXQ9BUH6 204 aa7.28□□□□□ -1.24
HMGN1-215ENST00000485550 MRPL16Q9NX20 251 aaKnown RBP7.28□□□□□ -1.24
HMGN1-215ENST00000485550 MRPS16Q9Y3D3 137 aaKnown RBP7.28□□□□□ -1.24
HMGN1-215ENST00000485550 IGHV1OR15-1A0A075B7D0 117 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 H3BNG1 76 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 SPINK4O60575 86 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 CRISP2P16562 243 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 TCL1AP56279 114 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 RANP62826 216 aaKnown RBP7.27□□□□□ -1.25
HMGN1-215ENST00000485550 S100ZQ8WXG8 99 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 FXYD5Q96DB9 178 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 PHYHIPLQ96FC7 376 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 C18orf15Q96N68 181 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 ARPC5LQ9BPX5 153 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 LINC00467Q9BRT7 94 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 UPK3BQ9BT76 320 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 NMES1Q9C002 83 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 WDR61Q9GZS3 305 aaKnown RBP7.27□□□□□ -1.25
HMGN1-215ENST00000485550 Q9H3A6 140 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 ZNF492Q9P255 531 aa7.27□□□□□ -1.25
HMGN1-215ENST00000485550 INMT-MINDY4F8WBC2 141 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 OR7C2O60412 319 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 UPK1BO75841 260 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 ZNF138P52744 262 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 IFITM3Q01628 133 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 MUC21Q5SSG8 566 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 LYPD1Q8N2G4 141 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 SMIM3Q9BZL3 60 aa7.26□□□□□ -1.25
HMGN1-215ENST00000485550 C17orf112F2Z3M2 114 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 PRAF2O60831 178 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 FUSP35637 526 aaKnown RBP eCLIP7.25□□□□□ -1.25
HMGN1-215ENST00000485550 CSN1S1P47710 185 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 H2BFSP57053 126 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 LINC00315P59091 139 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 FFAR4Q5NUL3 377 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 IBA57Q5T440 356 aaKnown RBP7.25□□□□□ -1.25
HMGN1-215ENST00000485550 PPP1R1CQ8WVI7 109 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 FRZBQ92765 325 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 ST6GAL2Q96JF0 529 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 HYLS1Q96M11 299 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 C8orf49Q96NF6 230 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 MRPL32Q9BYC8 188 aaKnown RBP7.25□□□□□ -1.25
HMGN1-215ENST00000485550 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
HMGN1-215ENST00000485550 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 A0A1W2PPQ1 181 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 SIVA1O15304 175 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 SSNA1O43805 119 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 NXPH4O95158 308 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 NMBP08949 121 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 SFTA3P0C7M3 94 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 XGP55808 180 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 UBE2L3P68036 154 aaKnown RBP7.24□□□□□ -1.25
HMGN1-215ENST00000485550 CYCSP99999 105 aaKnown RBP7.24□□□□□ -1.25
HMGN1-215ENST00000485550 FHL2Q14192 279 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 LINC00299Q6ZSB3 139 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 ATP5SQ99766 215 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 KCNIP2Q9NS61 270 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 MDFICQ9P1T7 246 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 RPH3ALQ9UNE2 315 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 HHLA3Q9XRX5 114 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 TNFRSF18Q9Y5U5 241 aa7.24□□□□□ -1.25
HMGN1-215ENST00000485550 MPC2O95563 127 aa7.23□□□□□ -1.25
HMGN1-215ENST00000485550 IFNA5P01569 189 aa7.23□□□□□ -1.25
HMGN1-215ENST00000485550 CRYBA4P53673 196 aa7.23□□□□□ -1.25
HMGN1-215ENST00000485550 ZNF415Q09FC8 603 aa7.23□□□□□ -1.25
HMGN1-215ENST00000485550 SCGB1C1Q8TD33 95 aa7.23□□□□□ -1.25
HMGN1-215ENST00000485550 PRO0255Q9UI72 69 aa7.23□□□□□ -1.25
HMGN1-215ENST00000485550 HSPB11Q9Y547 144 aa7.23□□□□□ -1.25
HMGN1-215ENST00000485550 TRGV4A0A0C4DH28 118 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 PGPA6NDG6 321 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 DIRC3C9JPN6 131 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
HMGN1-215ENST00000485550 BTF3P20290 206 aaKnown RBP7.22□□□□□ -1.25
HMGN1-215ENST00000485550 RPL12P30050 165 aaKnown RBP7.22□□□□□ -1.25
HMGN1-215ENST00000485550 ZNF266Q14584 549 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 TMEM183BQ1AE95 376 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 LYPD5Q6UWN5 251 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 TMEM183AQ8IXX5 376 aa7.22□□□□□ -1.25
HMGN1-215ENST00000485550 ZNF479Q96JC4 524 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms