RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 LINC01551Q86U37 167 aa13.62□□□□□ -0.23
ERCC2-205ENST00000485403 SMIM12Q96EX1 92 aa13.62□□□□□ -0.23
ERCC2-205ENST00000485403 C8orf49Q96NF6 230 aa13.62□□□□□ -0.23
ERCC2-205ENST00000485403 TUBA4BQ9H853 241 aa13.62□□□□□ -0.23
ERCC2-205ENST00000485403 HUWE1Q7Z6Z7 4374 aaKnown RBP13.62□□□□□ -0.23
ERCC2-205ENST00000485403 M0R036 132 aa13.61□□□□□ -0.23
ERCC2-205ENST00000485403 PNRC1Q12796 327 aaPredicted RBP13.61□□□□□ -0.23
ERCC2-205ENST00000485403 STHQ8IWL8 128 aa13.61□□□□□ -0.23
ERCC2-205ENST00000485403 CLRN3Q8NCR9 226 aa13.61□□□□□ -0.23
ERCC2-205ENST00000485403 MLST8Q9BVC4 326 aa13.61□□□□□ -0.23
ERCC2-205ENST00000485403 LENEPQ9Y5L5 61 aa13.61□□□□□ -0.23
ERCC2-205ENST00000485403 RBMY1BA6NDE4 496 aaKnown RBP13.6□□□□□ -0.23
ERCC2-205ENST00000485403 RBMY1EA6NEQ0 496 aaKnown RBP13.6□□□□□ -0.23
ERCC2-205ENST00000485403 RBMY1DP0C7P1 496 aaKnown RBP13.6□□□□□ -0.23
ERCC2-205ENST00000485403 BIN3Q9NQY0 253 aa13.6□□□□□ -0.23
ERCC2-205ENST00000485403 TRBV7-9A0A0J9YWB2 115 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 K7EN84 100 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 GCGP01275 180 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 LEPP41159 167 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 OR5I1Q13606 314 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 SMUG1Q53HV7 270 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 FAM19A4Q96LR4 140 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 ODF3Q96PU9 254 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 A8MTW9 85 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.59□□□□□ -0.23
ERCC2-205ENST00000485403 ZC2HC1AQ96GY0 325 aa13.59□□□□□ -0.23
ERCC2-205ENST00000485403 J3KRW8 73 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 CRISP2P16562 243 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 TSPOP30536 169 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 PRR27Q6MZM9 219 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 COX8CQ7Z4L0 72 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 SBSPONQ8IVN8 264 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 ISOC2Q96AB3 205 aa13.58□□□□□ -0.24
ERCC2-205ENST00000485403 TRPT1Q86TN4 253 aaKnown RBP13.57□□□□□ -0.24
ERCC2-205ENST00000485403 ZFAND2AQ8N6M9 145 aa13.57□□□□□ -0.24
ERCC2-205ENST00000485403 CLUHP3Q96NS8 147 aa13.57□□□□□ -0.24
ERCC2-205ENST00000485403 LOC102724200A0A096LPH7 203 aaPredicted RBP13.56□□□□□ -0.24
ERCC2-205ENST00000485403 GPX1P07203 203 aa13.56□□□□□ -0.24
ERCC2-205ENST00000485403 FXYD7P58549 80 aa13.56□□□□□ -0.24
ERCC2-205ENST00000485403 TMA7Q9Y2S6 64 aaKnown RBP13.56□□□□□ -0.24
ERCC2-205ENST00000485403 M0R2Z0 102 aa13.55□□□□□ -0.24
ERCC2-205ENST00000485403 RNASE4P34096 147 aaKnown RBP13.55□□□□□ -0.24
ERCC2-205ENST00000485403 SPINK13Q1W4C9 94 aa13.55□□□□□ -0.24
ERCC2-205ENST00000485403 RPL35AP18077 110 aaKnown RBP13.54□□□□□ -0.24
ERCC2-205ENST00000485403 CDKN1BP46527 198 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 ZNF80P51504 273 aaPredicted RBP13.54□□□□□ -0.24
ERCC2-205ENST00000485403 RHEBQ15382 184 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 FAM162BQ5T6X4 162 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 PRR9Q5T870 116 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 DAZAP1Q96EP5 407 aaKnown RBP13.54□□□□□ -0.24
ERCC2-205ENST00000485403 KLLNB2CW77 178 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 B4DEV8 164 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 NHLRC4P0CG21 123 aaPredicted RBP13.54□□□□□ -0.24
ERCC2-205ENST00000485403 CRIP1P50238 77 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 ERVFC1-1P60608 527 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 KIR3DS1Q14943 382 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 TM2D3Q9BRN9 247 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 RNASE7Q9H1E1 156 aaKnown RBP13.54□□□□□ -0.24
ERCC2-205ENST00000485403 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
ERCC2-205ENST00000485403 KIR2DL5BA0A0G2JN68 375 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 KIR2DL5BA0A0G2JPC4 375 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 C7orf77A4D0Y5 90 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 SH2D1AO60880 128 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 MT-ND4LP03901 98 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 NUTF2P61970 127 aaKnown RBP13.53□□□□□ -0.24
ERCC2-205ENST00000485403 KIR2DL5AQ8N109 375 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 C15orf54Q8N8G6 183 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 OR10G8Q8NGN5 311 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 KIR2DL5BQ8NHK3 375 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 OSTCQ9NRP0 149 aa13.53□□□□□ -0.24
ERCC2-205ENST00000485403 TRAV12-2A0A075B6T6 113 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 C7orf71A4D174 169 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 FABP5P3A8MUU1 101 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 PFN1P07737 140 aaKnown RBP13.52□□□□□ -0.25
ERCC2-205ENST00000485403 RNF212Q495C1 297 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 IBA57Q5T440 356 aaKnown RBP13.52□□□□□ -0.25
ERCC2-205ENST00000485403 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 FAM231DQ6ZW35 169 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 NUDT10Q8NFP7 164 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 NUDT11Q96G61 164 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 RPS10P5Q9NQ39 176 aa13.52□□□□□ -0.25
ERCC2-205ENST00000485403 C19orf71A6NCJ1 209 aa13.51□□□□□ -0.25
ERCC2-205ENST00000485403 P01737 135 aa13.51□□□□□ -0.25
ERCC2-205ENST00000485403 AMBPP02760 352 aa13.51□□□□□ -0.25
ERCC2-205ENST00000485403 APOC4P55056 127 aa13.51□□□□□ -0.25
ERCC2-205ENST00000485403 GFI1BQ5VTD9 330 aa13.51□□□□□ -0.25
ERCC2-205ENST00000485403 CBLN2Q8IUK8 224 aa13.51□□□□□ -0.25
ERCC2-205ENST00000485403 TRAV21A0A0B4J279 112 aa13.5□□□□□ -0.25
ERCC2-205ENST00000485403 PPP1R2P9O14990 202 aa13.5□□□□□ -0.25
ERCC2-205ENST00000485403 GATCO43716 136 aaKnown RBP13.5□□□□□ -0.25
ERCC2-205ENST00000485403 Q6AWC8 147 aa13.5□□□□□ -0.25
ERCC2-205ENST00000485403 MORN3Q6PF18 240 aaPredicted RBP13.5□□□□□ -0.25
ERCC2-205ENST00000485403 ANAPC16Q96DE5 110 aa13.5□□□□□ -0.25
ERCC2-205ENST00000485403 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
ERCC2-205ENST00000485403 ZNF705GA8MUZ8 300 aaPredicted RBP13.49□□□□□ -0.25
ERCC2-205ENST00000485403 Q6ZQT7 251 aa13.49□□□□□ -0.25
ERCC2-205ENST00000485403 H7BYZ3 331 aa13.49□□□□□ -0.25
ERCC2-205ENST00000485403 UBE2CO00762 179 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms