RNA–Protein interactions for RNA: ENST00000485091.5

CCDC78-214, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,734 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-214ENST00000485091 M0R2Z0 102 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 GPX1P07203 203 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 ZFAND2AQ8N6M9 145 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 FAM19A4Q96LR4 140 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 LENEPQ9Y5L5 61 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 AGRNO00468 2067 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 SH2D1AO60880 128 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
CCDC78-214ENST00000485091 SPINK13Q1W4C9 94 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 TMEM88Q6PEY1 159 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 Q6ZQT7 251 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 DEFB125Q8N687 156 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 C15orf54Q8N8G6 183 aa12.91□□□□□ -0.34
CCDC78-214ENST00000485091 TRAV12-2A0A075B6T6 113 aa12.9□□□□□ -0.34
CCDC78-214ENST00000485091 RBMY1BA6NDE4 496 aaKnown RBP12.9□□□□□ -0.34
CCDC78-214ENST00000485091 RBMY1EA6NEQ0 496 aaKnown RBP12.9□□□□□ -0.34
CCDC78-214ENST00000485091 ZNF705GA8MUZ8 300 aaPredicted RBP12.9□□□□□ -0.34
CCDC78-214ENST00000485091 H7BYZ3 331 aa12.9□□□□□ -0.34
CCDC78-214ENST00000485091 GATCO43716 136 aaKnown RBP12.9□□□□□ -0.34
CCDC78-214ENST00000485091 RBMY1DP0C7P1 496 aaKnown RBP12.9□□□□□ -0.34
CCDC78-214ENST00000485091 BTN1A1Q13410 526 aa12.9□□□□□ -0.34
CCDC78-214ENST00000485091 FAM162BQ5T6X4 162 aa12.9□□□□□ -0.34
CCDC78-214ENST00000485091 CBLN2Q8IUK8 224 aa12.9□□□□□ -0.34
CCDC78-214ENST00000485091 ANAPC16Q96DE5 110 aa12.9□□□□□ -0.34
CCDC78-214ENST00000485091 OSTCQ9NRP0 149 aa12.9□□□□□ -0.34
CCDC78-214ENST00000485091 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
CCDC78-214ENST00000485091 WIPF1O43516 503 aa12.89□□□□□ -0.35
CCDC78-214ENST00000485091 P01737 135 aa12.89□□□□□ -0.35
CCDC78-214ENST00000485091 LEPP41159 167 aa12.89□□□□□ -0.35
CCDC78-214ENST00000485091 AMTNQ6UX39 209 aa12.89□□□□□ -0.35
CCDC78-214ENST00000485091 COX8CQ7Z4L0 72 aa12.89□□□□□ -0.35
CCDC78-214ENST00000485091 FAM110AQ9BQ89 295 aa12.89□□□□□ -0.35
CCDC78-214ENST00000485091 CA1P00915 261 aaPredicted RBP12.88□□□□□ -0.35
CCDC78-214ENST00000485091 CRISP2P16562 243 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 RPL19P84098 196 aaKnown RBP12.88□□□□□ -0.35
CCDC78-214ENST00000485091 V9GYV3 84 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 NOTCH3Q9UM47 2321 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 A0A087WWC5 75 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 G3V4G9 280 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 RPL35AP18077 110 aaKnown RBP12.88□□□□□ -0.35
CCDC78-214ENST00000485091 CDKN1BP46527 198 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 FAM231DQ6ZW35 169 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 ODF3Q96PU9 254 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 CTDSP1Q9GZU7 261 aa12.88□□□□□ -0.35
CCDC78-214ENST00000485091 TMSB15BA0A087X1C1 80 aa12.87□□□□□ -0.35
CCDC78-214ENST00000485091 PFN1P07737 140 aaKnown RBP12.87□□□□□ -0.35
CCDC78-214ENST00000485091 TSPOP30536 169 aa12.87□□□□□ -0.35
CCDC78-214ENST00000485091 TRPT1Q86TN4 253 aaKnown RBP12.87□□□□□ -0.35
CCDC78-214ENST00000485091 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 TRBV7-9A0A0J9YWB2 115 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 A8MTW9 85 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 KLLNB2CW77 178 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 ORM1P02763 201 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 KRTAP10-11P60412 298 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 RPP21Q9H633 154 aaKnown RBP12.86□□□□□ -0.35
CCDC78-214ENST00000485091 URGCP-MRPS24S4R325 110 aa12.86□□□□□ -0.35
CCDC78-214ENST00000485091 GFI1BQ5VTD9 330 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 NAGKQ9UJ70 344 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 TRAV21A0A0B4J279 112 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 C7orf71A4D174 169 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 GZMBP10144 247 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 Q8N1Y9 231 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 SRD5A3Q9H8P0 318 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 SMCO4Q9NRQ5 59 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 C11orf21Q9P2W6 132 aa12.85□□□□□ -0.35
CCDC78-214ENST00000485091 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
CCDC78-214ENST00000485091 TCL1AP56279 114 aa12.84□□□□□ -0.35
CCDC78-214ENST00000485091 MUC21Q5SSG8 566 aa12.84□□□□□ -0.35
CCDC78-214ENST00000485091 TMEM242Q9NWH2 141 aa12.84□□□□□ -0.35
CCDC78-214ENST00000485091 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
CCDC78-214ENST00000485091 IL36BQ9NZH7 164 aa12.83□□□□□ -0.36
CCDC78-214ENST00000485091 XCL2Q9UBD3 114 aa12.83□□□□□ -0.36
CCDC78-214ENST00000485091 CRXO43186 299 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-214ENST00000485091 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
CCDC78-214ENST00000485091 Q6AWC8 147 aa12.82□□□□□ -0.36
CCDC78-214ENST00000485091 IGKV3D-20A0A0C4DH25 116 aa12.82□□□□□ -0.36
CCDC78-214ENST00000485091 GRIFINA4D1Z8 144 aa12.82□□□□□ -0.36
CCDC78-214ENST00000485091 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.82□□□□□ -0.36
CCDC78-214ENST00000485091 CLUHP3Q96NS8 147 aa12.82□□□□□ -0.36
CCDC78-214ENST00000485091 FBN3Q75N90 2809 aa12.81□□□□□ -0.36
CCDC78-214ENST00000485091 EGFEM1PQ0D2K5 195 aa12.81□□□□□ -0.36
CCDC78-214ENST00000485091 SAMD5Q5TGI4 173 aa12.81□□□□□ -0.36
CCDC78-214ENST00000485091 A8MWL6 223 aa12.8□□□□□ -0.36
CCDC78-214ENST00000485091 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
CCDC78-214ENST00000485091 RBMY1A1P0DJD3 496 aaKnown RBP12.8□□□□□ -0.36
CCDC78-214ENST00000485091 RBMY1CP0DJD4 496 aa12.8□□□□□ -0.36
CCDC78-214ENST00000485091 S100PP25815 95 aa12.8□□□□□ -0.36
CCDC78-214ENST00000485091 RBMY1FQ15415 496 aaKnown RBP12.8□□□□□ -0.36
CCDC78-214ENST00000485091 ANXA2RQ3ZCQ2 193 aa12.8□□□□□ -0.36
CCDC78-214ENST00000485091 TSKUQ8WUA8 353 aa12.8□□□□□ -0.36
CCDC78-214ENST00000485091 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
CCDC78-214ENST00000485091 CXorf65A6NEN9 183 aa12.79□□□□□ -0.36
CCDC78-214ENST00000485091 SPINK4O60575 86 aa12.79□□□□□ -0.36
CCDC78-214ENST00000485091 LINC01559Q495D7 138 aa12.79□□□□□ -0.36
CCDC78-214ENST00000485091 KCNIP4Q6PIL6 250 aa12.79□□□□□ -0.36
CCDC78-214ENST00000485091 NEU1Q99519 415 aa12.79□□□□□ -0.36
CCDC78-214ENST00000485091 TPPP3Q9BW30 176 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms