RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SIX6O95475 246 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 CRYBA4P53673 196 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 IQCF2Q8IXL9 164 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 CSN1S1P47710 185 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 LINC00315P59091 139 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 KRTAP10-2P60368 255 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 FHL2Q14192 279 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 ENKURQ8TC29 256 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 PHYHIPLQ96FC7 376 aa7.85□□□□□ -1.15
SCFD1-206ENST00000484733 UPK1BO75841 260 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
SCFD1-206ENST00000484733 Q6AWC8 147 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 Q6ZQT7 251 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 ATP5SQ99766 215 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 SPXQ9BT56 116 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 MRPL16Q9NX20 251 aaKnown RBP7.84□□□□□ -1.15
SCFD1-206ENST00000484733 HHLA3Q9XRX5 114 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 DNAH5Q8TE73 4624 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 NXPH4O95158 308 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 TMED6Q8WW62 240 aa7.84□□□□□ -1.15
SCFD1-206ENST00000484733 OR10J4P0C629 311 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 LYPD5Q6UWN5 251 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 OR10G4Q8NGN3 311 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 PGPEP1Q9NXJ5 209 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 HSPB11Q9Y547 144 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 DIRC3C9JPN6 131 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 INMT-MINDY4F8WBC2 141 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 OR7C2O60412 319 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 IGHV3-53P01767 116 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 NFE4Q86UQ8 179 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 Q8TAT8 98 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 RASL10AQ92737 203 aa7.83□□□□□ -1.16
SCFD1-206ENST00000484733 K7EP13 123 aa7.82□□□□□ -1.16
SCFD1-206ENST00000484733 TAS2R45P59539 299 aa7.82□□□□□ -1.16
SCFD1-206ENST00000484733 RANP62826 216 aaKnown RBP7.82□□□□□ -1.16
SCFD1-206ENST00000484733 LRRC37A5PQ49AS3 106 aa7.82□□□□□ -1.16
SCFD1-206ENST00000484733 KHDC3LQ587J8 217 aa7.82□□□□□ -1.16
SCFD1-206ENST00000484733 NEGR1Q7Z3B1 354 aa7.82□□□□□ -1.16
SCFD1-206ENST00000484733 C8orf49Q96NF6 230 aa7.82□□□□□ -1.16
SCFD1-206ENST00000484733 TRGV11A0A075B6L2 103 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 UBE2L3P68036 154 aaKnown RBP7.81□□□□□ -1.16
SCFD1-206ENST00000484733 TDRG1Q3Y452 100 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 FFAR4Q5NUL3 377 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 PPP1R1CQ8WVI7 109 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 MARVELD1Q9BSK0 173 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 OTORQ9NRC9 128 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 MDFICQ9P1T7 246 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 TRAV9-2A0A087WT02 112 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 EREGO14944 169 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 H2BFSP57053 126 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 IFITM3Q01628 133 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
SCFD1-206ENST00000484733 TRGV4A0A0C4DH28 118 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 MPC2O95563 127 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 IFNA5P01569 189 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 ORM1P02763 201 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 PET100P0DJ07 73 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 ERVFC1-1P60608 527 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 MUC21Q5SSG8 566 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 FAM159AQ6UWV7 190 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 SCGB1C1Q8TD33 95 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 SCRT2Q9NQ03 307 aa7.8□□□□□ -1.16
SCFD1-206ENST00000484733 TRAV4A0A0B4J268 109 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 K7EQD1 137 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 RPL12P30050 165 aaKnown RBP7.79□□□□□ -1.16
SCFD1-206ENST00000484733 ZNF479Q96JC4 524 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 SRIP30626 198 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 TMEM183BQ1AE95 376 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 FAM74A1Q5RGS3 127 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 TMEM183AQ8IXX5 376 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 PCNPQ8WW12 178 aaKnown RBP7.79□□□□□ -1.16
SCFD1-206ENST00000484733 LY96Q9Y6Y9 160 aa7.79□□□□□ -1.16
SCFD1-206ENST00000484733 PGPA6NDG6 321 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 TIRAPP58753 221 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 ACOT6Q3I5F7 207 aaPredicted RBP7.78□□□□□ -1.16
SCFD1-206ENST00000484733 PQLC2Q6ZP29 291 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 PTTG2Q9NZH5 202 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 MBD2Q9UBB5 411 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 TRAV21A0A0B4J279 112 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 M0R2P5 195 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 DNAH10OSP0CZ25 163 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 SH2D6Q7Z4S9 175 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 CMTM2Q8TAZ6 248 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 TXNDC17Q9BRA2 123 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 WFDC1Q9HC57 220 aa7.78□□□□□ -1.16
SCFD1-206ENST00000484733 A6NHS1 94 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 C9JCJ5 164 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 SFTA3P0C7M3 94 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 GYPEP15421 78 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 MSRB1Q9NZV6 116 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 A0A087WTM6 91 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 SSNA1O43805 119 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 EVI2AP22794 236 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 OR4C5Q8NGB2 326 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 KCNS1Q96KK3 526 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 SMIM3Q9BZL3 60 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
SCFD1-206ENST00000484733 A0A1W2PPV4 95 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms