RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 K7EQM0 130 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 TPT1P13693 172 aaKnown RBP7.12□□□□□ -1.27
CPSF4-213ENST00000484112 C12orf74Q32Q52 190 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 CCDC28AQ8IWP9 274 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 C5orf17Q8NAS9 161 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 TCEAL7Q9BRU2 100 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 NDUFAF3Q9BU61 184 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 ZNF471Q9BX82 626 aaPredicted RBP7.12□□□□□ -1.27
CPSF4-213ENST00000484112 KRTAP4-5Q9BYR2 181 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 DKK2Q9UBU2 259 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 CELA1Q9UNI1 258 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 ARL2-SNX15V9GYD0 113 aa7.12□□□□□ -1.27
CPSF4-213ENST00000484112 DNAH6Q9C0G6 4158 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 LINC00862A6NCI5 91 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 GPX1P07203 203 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 CLLU1Q5K131 121 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 ZNF575Q86XF7 245 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 UBE2DNLQ8IWF7 75 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 FAM210BQ96KR6 192 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 VGLL1Q99990 258 aa7.11□□□□□ -1.27
CPSF4-213ENST00000484112 YTHDF2Q9Y5A9 579 aaKnown RBP7.11□□□□□ -1.27
CPSF4-213ENST00000484112 IGKV2-40A0A087WW87 121 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-213ENST00000484112 HMGB3O15347 200 aaKnown RBP7.1□□□□□ -1.27
CPSF4-213ENST00000484112 ZNF324O75467 553 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-213ENST00000484112 IGKV2D-40P01614 121 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-213ENST00000484112 RAB5CP51148 216 aa7.1□□□□□ -1.27
CPSF4-213ENST00000484112 ERCC8Q13216 396 aa7.1□□□□□ -1.27
CPSF4-213ENST00000484112 ZNF726P1Q15940 193 aa7.1□□□□□ -1.27
CPSF4-213ENST00000484112 ANXA2RQ3ZCQ2 193 aa7.1□□□□□ -1.27
CPSF4-213ENST00000484112 FAM222AQ5U5X8 452 aa7.1□□□□□ -1.27
CPSF4-213ENST00000484112 ZFAND2AQ8N6M9 145 aa7.1□□□□□ -1.27
CPSF4-213ENST00000484112 RNASE8Q8TDE3 154 aaKnown RBP7.1□□□□□ -1.27
CPSF4-213ENST00000484112 TIMM8BQ9Y5J9 83 aaPredicted RBP7.1□□□□□ -1.27
CPSF4-213ENST00000484112 ABCA13Q86UQ4 5058 aa7.1□□□□□ -1.27
CPSF4-213ENST00000484112 MUC4Q99102 2169 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 DNAH2Q9P225 4427 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 DYNC1H1Q14204 4646 aaKnown RBP7.09□□□□□ -1.27
CPSF4-213ENST00000484112 TRAV12-3A0A0B4J271 114 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 MAP1LC3B2A6NCE7 125 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 ZNF705GA8MUZ8 300 aaPredicted RBP7.09□□□□□ -1.27
CPSF4-213ENST00000484112 TCRAP04437 139 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 S100A1P23297 94 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 FHITP49789 147 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 PPT1P50897 306 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 EMP1P54849 157 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 LGALS9BQ3B8N2 356 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 IBA57Q5T440 356 aaKnown RBP7.09□□□□□ -1.27
CPSF4-213ENST00000484112 Q6AWC8 147 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 MBD3L1Q8WWY6 194 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 HIST1H2BAQ96A08 127 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 FAM210AQ96ND0 272 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 ATG101Q9BSB4 218 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 NDFIP1Q9BT67 221 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 MAP1LC3BQ9GZQ8 125 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 MED9Q9NWA0 146 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 PLA2G2EQ9NZK7 142 aa7.09□□□□□ -1.27
CPSF4-213ENST00000484112 DNAH11Q96DT5 4516 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 FAT2Q9NYQ8 4349 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 PLAC8L1A1L4L8 177 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 RNASE4P34096 147 aaKnown RBP7.08□□□□□ -1.28
CPSF4-213ENST00000484112 DAD1P61803 113 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 SUMO1P63165 101 aaKnown RBP7.08□□□□□ -1.28
CPSF4-213ENST00000484112 DAZ2Q13117 558 aaKnown RBP7.08□□□□□ -1.28
CPSF4-213ENST00000484112 KIR3DS1Q14943 382 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 GOLT1AQ6ZVE7 132 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 SSX7Q7RTT5 188 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 SLC7A5P1Q8MH63 180 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 EIF4E3Q8N5X7 224 aaKnown RBP7.08□□□□□ -1.28
CPSF4-213ENST00000484112 CYB561D1Q8N8Q1 229 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 TMEM75Q8N9X5 138 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 EPDR1Q9UM22 224 aa7.08□□□□□ -1.28
CPSF4-213ENST00000484112 DNAH17Q9UFH2 4485 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 IGHV1OR15-1A0A075B7D0 117 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 FAM74A7A6NL05 159 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 SNURFLB1AK76 121 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 GGTLC3B5MD39 225 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 F6UZH7 168 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 TEX46H3BTG2 121 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 EIF3GO75821 320 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPSF4-213ENST00000484112 HTN1P15515 57 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 AZU1P20160 251 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 RAB14P61106 215 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 BTN1A1Q13410 526 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 TDRG1Q3Y452 100 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 SOHLH1Q5JUK2 328 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 SAPCD1Q5SSQ6 148 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 IQCF2Q8IXL9 164 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 LINC00612Q8N6U2 182 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 Q8TAT8 98 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 C18orf15Q96N68 181 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 TP53TG3Q9ULZ0 132 aa7.07□□□□□ -1.28
CPSF4-213ENST00000484112 TRAV1-1A0A0B4J248 108 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 TRAV21A0A0B4J279 112 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 CBY3A6NI87 242 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 J3KRW8 73 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 H2AFB1P0C5Y9 115 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 PRB4P10163 310 aaPredicted RBP7.06□□□□□ -1.28
CPSF4-213ENST00000484112 HTN3P15516 51 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 FAM213BQ8TBF2 198 aa7.06□□□□□ -1.28
CPSF4-213ENST00000484112 SFT2D1Q8WV19 159 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms