RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 PF4V1P10720 104 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 DLX6P56179 175 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 TWIST1Q15672 202 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 EXOC3-AS1Q8N2X6 119 aa9.05□□□□□ -0.96
SEC61A1-205ENST00000483956 MGAQ8IWI9 3026 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 TCL1BO95988 128 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 RPL27AP46776 148 aaKnown RBP9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 C22orf34Q6ZV56 151 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 CSDC2Q9Y534 153 aaKnown RBP9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 ARFGEF3Q5TH69 2177 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 TRAV8-2A0A0B4J237 113 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 CRYGBP07316 175 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 CRIP1P50238 77 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 RASL11BQ9BPW5 248 aa9.04□□□□□ -0.96
SEC61A1-205ENST00000483956 SPTBN4Q9H254 2564 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 MYMXA0A1B0GTQ4 84 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 TMEM178BH3BS89 294 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 NDUFB3O43676 98 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 GAS8-AS1O95177 125 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 UBE2D3P61077 147 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 UBE2D2P62837 147 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 TMEM75Q8N9X5 138 aa9.03□□□□□ -0.96
SEC61A1-205ENST00000483956 TMEM155Q4W5P6 130 aa9.02□□□□□ -0.96
SEC61A1-205ENST00000483956 ASCL5Q7RTU5 278 aa9.02□□□□□ -0.96
SEC61A1-205ENST00000483956 RASL10AQ92737 203 aa9.02□□□□□ -0.96
SEC61A1-205ENST00000483956 SLC25A39Q9BZJ4 359 aaPredicted RBP9.02□□□□□ -0.96
SEC61A1-205ENST00000483956 PLXNB1O43157 2135 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 LOXP28300 417 aaPredicted RBP9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 FAM27E3Q08E93 113 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 ADIPOQQ15848 244 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 SPXQ9BT56 116 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 ZNF318Q5VUA4 2279 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 CEP295Q9C0D2 2601 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 NCBP2LA6PVI3 153 aaKnown RBP9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 NDUFA3O95167 84 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 SBSPONQ8IVN8 264 aa9.02□□□□□ -0.97
SEC61A1-205ENST00000483956 TEX22C9J3V5 150 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 DEFB109BQ30KR1 87 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 C5orf47Q569G3 176 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 IGFL3Q6UXB1 125 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 SIGLEC9Q9Y336 463 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 TPRP12270 2363 aaKnown RBP9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 OTOGLQ3ZCN5 2332 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 ENSAO43768 121 aaKnown RBP9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 ATP5LO75964 103 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 LYZP61626 148 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 IGF2-ASQ6U949 168 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 LYPD2Q6UXB3 125 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 NRGNQ92686 78 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 KAAG1Q9UBP8 84 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 CTSZQ9UBR2 303 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 DMXL2Q8TDJ6 3036 aa9.01□□□□□ -0.97
SEC61A1-205ENST00000483956 LYPD1Q8N2G4 141 aa9□□□□□ -0.97
SEC61A1-205ENST00000483956 TRBV19A0A075B6N1 114 aa9□□□□□ -0.97
SEC61A1-205ENST00000483956 IGHV3-21A0A0B4J1V1 117 aa9□□□□□ -0.97
SEC61A1-205ENST00000483956 ASIPP42127 132 aa9□□□□□ -0.97
SEC61A1-205ENST00000483956 RAXQ9Y2V3 346 aa9□□□□□ -0.97
SEC61A1-205ENST00000483956 I3L2K1 104 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 Q6Q795 121 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 SHANK2-AS3Q9BTD1 123 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 SCNM1Q9BWG6 230 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 NGBQ9NPG2 151 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 IGHV3-72A0A0B4J1Y9 119 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 UBE2D1P51668 147 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 LGALS1P09382 135 aaKnown RBP8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 CNTFRP26992 372 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 SIGLEC15Q6ZMC9 328 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 C8orf49Q96NF6 230 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 MDFICQ9P1T7 246 aa8.99□□□□□ -0.97
SEC61A1-205ENST00000483956 LINC01619G3V211 115 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 IGKV1-17P01599 117 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 PRR30Q53SZ7 412 aaPredicted RBP8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 OR11H6Q8NGC7 330 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 CCL17Q92583 94 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 LINC01587Q99440 93 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 LOC107984640A0A0U1RRK4 108 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 H3BRN7 92 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 IGLV1-47P01700 117 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 APELAP0DMC3 54 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 GATA1P15976 413 aaPredicted RBP8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 C15orf53Q8NAA6 179 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 TMEM126AQ9H061 195 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 PIEZO2Q9H5I5 2752 aa8.98□□□□□ -0.97
SEC61A1-205ENST00000483956 K7EM74 188 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 IGHG4P01861 327 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 SCGB1C2P0DMR2 95 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 LINC00694P0DN24 101 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 LYRM7Q5U5X0 104 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 OR10J6PQ8NGY7 276 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 ODF3Q96PU9 254 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 CHCHD5Q9BSY4 110 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 AAMDCQ9H7C9 122 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 SLC25A20O43772 301 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 CRIP2P52943 208 aaPredicted RBP8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 FAM57AQ8TBR7 257 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 MSRB1Q9NZV6 116 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 ZNF292O60281 2723 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 IGHV1-3A0A0C4DH29 117 aa8.97□□□□□ -0.97
SEC61A1-205ENST00000483956 BSPH1Q075Z2 132 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms