RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 NDUFA7O95182 113 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 S100A8P05109 93 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 CBLN1P23435 193 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 ZNF138P52744 262 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 NDUFA6P56556 154 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 HIST1H1AQ02539 215 aaPredicted RBP4.09□□□□□ -1.75
COL17A1-206ENST00000483876 Q0VG73 95 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 FABP9Q0Z7S8 132 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 SMUG1Q53HV7 270 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 TM4SF20Q53R12 229 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 TMEM78Q5T7P6 136 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 LCNL1Q6ZST4 164 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 NUP35Q8NFH5 326 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 OR2D3Q8NGH3 330 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 ZC2HC1AQ96GY0 325 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 C16orf92Q96LL3 132 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 SGK494Q96LW2 274 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 NEU1Q99519 415 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 VGLL1Q99990 258 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 AGPAT4-IT1Q9H0P7 198 aa4.09□□□□□ -1.75
COL17A1-206ENST00000483876 IGHV3OR16-13A0A075B7E8 117 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 IGHV3-74A0A0B4J1X5 117 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 IGHV3-66A0A0C4DH42 116 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 A0A1B0GXF2 115 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 TMEM213A2RRL7 107 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 TMEM189A5PLL7 270 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 PRAC2D3DTV9 90 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 F2Z2F3 143 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 LINC01619G3V211 115 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 ZNF207O43670 478 aaKnown RBP4.08□□□□□ -1.76
COL17A1-206ENST00000483876 ESDP10768 282 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 HOXD3P31249 432 aaPredicted RBP4.08□□□□□ -1.76
COL17A1-206ENST00000483876 PAFAH1B2P68402 229 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 TCTEX1D4Q5JR98 221 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 OR10J3Q5JRS4 329 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 PRR27Q6MZM9 219 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 C10orf99Q6UWK7 81 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 TMEM136Q6ZRR5 245 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 TCF24Q7RTU0 167 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 APRG1Q8IVJ8 170 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 GATD1Q8NB37 220 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 OR1N2Q8NGR9 330 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 OR10J6PQ8NGY7 276 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 DCANP1Q8TF63 244 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 GTSF1Q8WW33 167 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 FAM19A4Q96LR4 140 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 PACRGQ96M98 296 aaPredicted RBP4.08□□□□□ -1.76
COL17A1-206ENST00000483876 CITED1Q99966 193 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 MRPL18Q9H0U6 180 aaKnown RBP4.08□□□□□ -1.76
COL17A1-206ENST00000483876 SIGLEC8Q9NYZ4 499 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 PEMTQ9UBM1 199 aa4.08□□□□□ -1.76
COL17A1-206ENST00000483876 IGHV4OR15-8A0A075B7B6 117 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 A0A087WW49 117 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 IGKV2-40A0A087WW87 121 aaPredicted RBP4.07□□□□□ -1.76
COL17A1-206ENST00000483876 IGHV3-49A0A0A0MS15 119 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 TRAV25A0A0B4J276 109 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 A0A1B0GUT8 65 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 C2orf70A6NJV1 201 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 SNURFLB1AK76 121 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 SH2D1AO60880 128 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 CA1P00915 261 aaPredicted RBP4.07□□□□□ -1.76
COL17A1-206ENST00000483876 IGKV2D-40P01614 121 aaPredicted RBP4.07□□□□□ -1.76
COL17A1-206ENST00000483876 APCSP02743 223 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 CRISP2P16562 243 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 HLA-DMBP28068 263 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 TCL1AP56279 114 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 SYNJ2BPP57105 145 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 SNRPD3P62318 126 aaKnown RBP4.07□□□□□ -1.76
COL17A1-206ENST00000483876 RPL11P62913 178 aaKnown RBP4.07□□□□□ -1.76
COL17A1-206ENST00000483876 HBBP68871 147 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 RIGQ13278 110 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 LINC01559Q495D7 138 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 IGFL4Q6B9Z1 124 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 ZNF493Q6ZR52 646 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 RNF182Q8N6D2 247 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 OR11H1Q8NG94 326 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 OR8A1Q8NGG7 326 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 LINC01006Q8NI28 216 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 DPF1Q92782 380 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 C8orf49Q96NF6 230 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 ODF3Q96PU9 254 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 CNFNQ9BYD5 112 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 STAB2Q8WWQ8 2551 aa4.07□□□□□ -1.76
COL17A1-206ENST00000483876 IGHV4-4A0A075B6R2 117 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 A0A1B0GUS0 222 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 K7EQG2 157 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 FRMD6-AS1P0C7T7 363 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 IGLC6P0CF74 106 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 S100A2P29034 98 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 ERCC8Q13216 396 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 FHL3Q13643 280 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 DEFB121Q5J5C9 76 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 DNLZQ5SXM8 178 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 ZNF575Q86XF7 245 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 LINC00518Q8N0U6 118 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 HIST3H2BBQ8N257 126 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 ZNF738Q8NE65 137 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 OR9G4Q8NGQ1 327 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 MUC7Q8TAX7 377 aa4.06□□□□□ -1.76
COL17A1-206ENST00000483876 BORCS7Q96B45 105 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms