RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MRPL54Q6P161 138 aaKnown RBP10.55□□□□□ -0.72
CLK3-204ENST00000483723 OR10J6PQ8NGY7 276 aa10.55□□□□□ -0.72
CLK3-204ENST00000483723 DUX3Q96PT4 197 aa10.55□□□□□ -0.72
CLK3-204ENST00000483723 MRPL18Q9H0U6 180 aaKnown RBP10.55□□□□□ -0.72
CLK3-204ENST00000483723 TMEM189A5PLL7 270 aa10.54□□□□□ -0.72
CLK3-204ENST00000483723 TCF21O43680 179 aa10.54□□□□□ -0.72
CLK3-204ENST00000483723 CRLF1O75462 422 aa10.54□□□□□ -0.72
CLK3-204ENST00000483723 ZNF705DP0CH99 300 aaPredicted RBP10.54□□□□□ -0.72
CLK3-204ENST00000483723 ZNF705BP0CI00 300 aaPredicted RBP10.54□□□□□ -0.72
CLK3-204ENST00000483723 GZMBP10144 247 aa10.54□□□□□ -0.72
CLK3-204ENST00000483723 RPS20P60866 119 aaKnown RBP10.54□□□□□ -0.72
CLK3-204ENST00000483723 HIST1H1AQ02539 215 aaPredicted RBP10.54□□□□□ -0.72
CLK3-204ENST00000483723 TRAV2A0A0B4J234 112 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 CCL24O00175 119 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 HLA-DQA1P01909 254 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 GDF5OSQ5U4N7 250 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 Q6AWC8 147 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 HIST2H2BDQ6DRA6 164 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 WFDC3Q8IUB2 231 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 APRG1Q8IVJ8 170 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 XKRY2A2RUG3 117 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 HAX1O00165 279 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 DEFB1P60022 68 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 LINC01559Q495D7 138 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 C11orf44Q8N8P7 122 aa10.53□□□□□ -0.72
CLK3-204ENST00000483723 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.73
CLK3-204ENST00000483723 F6UB75 175 aa10.52□□□□□ -0.73
CLK3-204ENST00000483723 CRISP2P16562 243 aa10.52□□□□□ -0.73
CLK3-204ENST00000483723 PAFAH1B2P68402 229 aa10.52□□□□□ -0.73
CLK3-204ENST00000483723 SIGLEC8Q9NYZ4 499 aa10.52□□□□□ -0.73
CLK3-204ENST00000483723 DEFB114Q30KQ6 69 aa10.51□□□□□ -0.73
CLK3-204ENST00000483723 GATD1Q8NB37 220 aa10.51□□□□□ -0.73
CLK3-204ENST00000483723 IGLC6P0CF74 106 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 SNRPD3P62318 126 aaKnown RBP10.5□□□□□ -0.73
CLK3-204ENST00000483723 HBBP68871 147 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 C11orf21Q9P2W6 132 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 IGKV3D-20A0A0C4DH25 116 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 A0A1B0GUT8 65 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 A0A1W2PRX2 142 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 TFPI2P48307 235 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 PRR9Q5T870 116 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 ODF3Q96PU9 254 aa10.5□□□□□ -0.73
CLK3-204ENST00000483723 A0A0J9YX75 114 aa10.49□□□□□ -0.73
CLK3-204ENST00000483723 A0A1B0GW15 77 aa10.49□□□□□ -0.73
CLK3-204ENST00000483723 ORM1P02763 201 aa10.49□□□□□ -0.73
CLK3-204ENST00000483723 KRTAP10-3P60369 221 aa10.49□□□□□ -0.73
CLK3-204ENST00000483723 RIGQ13278 110 aa10.49□□□□□ -0.73
CLK3-204ENST00000483723 PSMG4Q5JS54 123 aa10.49□□□□□ -0.73
CLK3-204ENST00000483723 TMSB15BA0A087X1C1 80 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 TRAV25A0A0B4J276 109 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 A0A1B0GUS0 222 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 KLLNB2CW77 178 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 APCSP02743 223 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 ARMS2P0C7Q2 107 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 CTRLP40313 264 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 CAMPP49913 170 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 RAB4BP61018 213 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 Q0VG73 95 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 SLAQ13239 276 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 TMEM61Q8N0U2 210 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 HIST3H2BBQ8N257 126 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 MTORP42345 2549 aa10.48□□□□□ -0.73
CLK3-204ENST00000483723 IFITM10A6NMD0 228 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 GFI1BQ5VTD9 330 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 CNFNQ9BYD5 112 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 TRAV21A0A0B4J279 112 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 A8MTW9 85 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 FOXI2Q6ZQN5 318 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 Q6ZQT7 251 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 NDUFA11Q86Y39 141 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 FER1L6-AS1Q8NA97 138 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 DYNLRB2Q8TF09 96 aa10.47□□□□□ -0.73
CLK3-204ENST00000483723 DUSP14O95147 198 aaKnown RBP10.46□□□□□ -0.74
CLK3-204ENST00000483723 S100A8P05109 93 aa10.46□□□□□ -0.74
CLK3-204ENST00000483723 GPX1P07203 203 aa10.46□□□□□ -0.74
CLK3-204ENST00000483723 KIAA1644Q3SXP7 199 aa10.46□□□□□ -0.74
CLK3-204ENST00000483723 EBLN2Q6P2I7 272 aa10.46□□□□□ -0.74
CLK3-204ENST00000483723 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.74
CLK3-204ENST00000483723 SSBP4Q9BWG4 385 aaPredicted RBP10.46□□□□□ -0.74
CLK3-204ENST00000483723 TP53TG3Q9ULZ0 132 aa10.46□□□□□ -0.74
CLK3-204ENST00000483723 FN1P02751 2386 aaKnown RBP10.45□□□□□ -0.74
CLK3-204ENST00000483723 C2CD3Q4AC94 2353 aa10.45□□□□□ -0.74
CLK3-204ENST00000483723 F2Z2F3 143 aa10.45□□□□□ -0.74
CLK3-204ENST00000483723 CD300EQ496F6 205 aaPredicted RBP10.45□□□□□ -0.74
CLK3-204ENST00000483723 BORCS7Q96B45 105 aa10.45□□□□□ -0.74
CLK3-204ENST00000483723 SPAG8Q99932 426 aaPredicted RBP10.45□□□□□ -0.74
CLK3-204ENST00000483723 GRIFINA4D1Z8 144 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 CD33P20138 364 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 KIR3DS1Q14943 382 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 OR10J3Q5JRS4 329 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 ZNF256Q9Y2P7 627 aaPredicted RBP10.44□□□□□ -0.74
CLK3-204ENST00000483723 CUBNO60494 3623 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 ESDP10768 282 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
CLK3-204ENST00000483723 LEPP41159 167 aa10.44□□□□□ -0.74
CLK3-204ENST00000483723 DNLZQ5SXM8 178 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms