RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 H3BMM0 161 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 LGALS9O00182 355 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 CCL1P22362 96 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 NPC2P61916 151 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 CCL8P80075 99 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 ATXN8Q156A1 80 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 FHL5Q5TD97 284 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 Q5XG85 94 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 Q6ZQT7 251 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 DRAM1Q8N682 238 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 C3orf56Q8N813 242 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 DCAF4L2Q8NA75 395 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 NUP37Q8NFH4 326 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 UBE2WQ96B02 151 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 CYYR1Q96J86 154 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 BMFQ96LC9 184 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 SPACA5Q96QH8 159 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 HDHD3Q9BSH5 251 aaPredicted RBP3.17□□□□□ -1.9
LTN1-205ENST00000483326 CALYQ9NYX4 217 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 LINC00527Q9UJ94 153 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 CACNA1IQ9P0X4 2223 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 TRPM6Q9BX84 2022 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 CPAMD8Q8IZJ3 1885 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 MDC1Q14676 2089 aaKnown RBP3.17□□□□□ -1.9
LTN1-205ENST00000483326 TRAV12-2A0A075B6T6 113 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 TMSB15BA0A087X1C1 80 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 TRAV17A0A0B4J275 112 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 EPOPA6NHQ4 379 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 M0R1B8 84 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 P01737 135 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 CRYGSP22914 178 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 UBE2E1P51965 193 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 MRPS36P82909 103 aaKnown RBP3.17□□□□□ -1.9
LTN1-205ENST00000483326 TFF3Q07654 80 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 EBI3Q14213 229 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 C17orf58Q2M2W7 97 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 TMEM30BQ3MIR4 351 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 VMA21Q3ZAQ7 101 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 RUSC1-AS1Q66K80 236 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 ZNF493Q6ZR52 646 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 LINC00643Q86TS7 51 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 UBE2E2Q96LR5 201 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 C18orf15Q96N68 181 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 ODF3Q96PU9 254 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 PLA2G2FQ9BZM2 168 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 RPP21Q9H633 154 aaKnown RBP3.17□□□□□ -1.9
LTN1-205ENST00000483326 CDH23Q9H251 3354 aa3.17□□□□□ -1.9
LTN1-205ENST00000483326 GTF3C1Q12789 2109 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 KIF26BQ2KJY2 2108 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 MED12LQ86YW9 2145 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 LYZL6O75951 148 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 ZFAND5O76080 213 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 LTAP01374 205 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 PLNP26678 52 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 PCBD1P61457 104 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 HERVK_113P61574 105 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 ZNF816Q0VGE8 651 aaPredicted RBP3.16□□□□□ -1.9
LTN1-205ENST00000483326 PMAIP1Q13794 54 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 DYNLRB1Q9NP97 96 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 CCL28Q9NRJ3 127 aa3.16□□□□□ -1.9
LTN1-205ENST00000483326 KIAA2026Q5HYC2 2103 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 RBMY1BA6NDE4 496 aaKnown RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 PGPA6NDG6 321 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 RBMY1EA6NEQ0 496 aaKnown RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 NTN3O00634 580 aaPredicted RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 TCL1BO95988 128 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 COX6CP09669 75 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 RBMY1DP0C7P1 496 aaKnown RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 RBMY1A1P0DJD3 496 aaKnown RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 CTLA4P16410 223 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 IGHV1-2P23083 117 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 CLLU1OSQ5K130 101 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 GDF5OSQ5U4N7 250 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 Q6ZRP5 223 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 MRPL55Q7Z7F7 128 aaKnown RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 EXOC3-AS1Q8N2X6 119 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 POM121L12Q8N7R1 296 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 CHCHD10Q8WYQ3 142 aaPredicted RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 BORCS8Q96FH0 119 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 IGF2BP2-AS1Q96M15 143 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 OCR1Q9BZK8 76 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 FGF22Q9HCT0 170 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 AMMECR1Q9Y4X0 333 aaPredicted RBP3.15□□□□□ -1.9
LTN1-205ENST00000483326 SERP1Q9Y6X1 66 aa3.15□□□□□ -1.9
LTN1-205ENST00000483326 ZDBF2Q9HCK1 2354 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 PIEZO1Q92508 2521 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 HCFC1P51610 2035 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 RALGAPA1Q6GYQ0 2036 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 SPTBN5Q9NRC6 3674 aaKnown RBP3.15□□□□□ -1.91
LTN1-205ENST00000483326 EYSQ5T1H1 3165 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 IGKV1D-42A0A075B6H8 117 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 TRBV7-3A0A075B6L6 115 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 IGHV4-30-2A0A087WSY4 118 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 IGKV1-9A0A0C4DH69 117 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 A0A0G2JRQ6 117 aa3.15□□□□□ -1.91
LTN1-205ENST00000483326 TRBV10-2A0A0K0K1G8 114 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms