RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 RPL34P49207 117 aaKnown RBP9.25□□□□□ -0.93
TRIM27-205ENST00000481474 RIF1Q5UIP0 2472 aaKnown RBP9.25□□□□□ -0.93
TRIM27-205ENST00000481474 USP17L23D6RBM5 183 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 NREPQ16612 68 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 PLXND1Q9Y4D7 1925 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 C7orf33Q8WU49 177 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 FAM231BA6NCW3 169 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 COX7A2LO14548 114 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 NDUFA12Q9UI09 145 aa9.25□□□□□ -0.93
TRIM27-205ENST00000481474 TIAM2Q8IVF5 1701 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 IGHV2-70DA0A0C4DH43 119 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 PRRC2AP48634 2157 aaKnown RBP9.24□□□□□ -0.93
TRIM27-205ENST00000481474 ATP5G1P05496 136 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 SDHAF1A6NFY7 115 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 SRP19P09132 144 aaKnown RBP9.24□□□□□ -0.93
TRIM27-205ENST00000481474 UBE2D2P62837 147 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 DAND5Q8N907 189 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 NRAPQ86VF7 1730 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 C3orf22Q8N5N4 141 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 MED12LQ86YW9 2145 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 FAM19A1Q7Z5A9 133 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 MUSTN1Q8IVN3 82 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 SMDT1Q9H4I9 107 aa9.24□□□□□ -0.93
TRIM27-205ENST00000481474 LRRC37A3O60309 1634 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 DLEU1O43261 78 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 NUP35Q8NFH5 326 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 PRR14LQ5THK1 2151 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 ATP5IP56385 69 aaPredicted RBP9.23□□□□□ -0.93
TRIM27-205ENST00000481474 TSKUQ8WUA8 353 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 HHLA3Q9XRX5 114 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 IGLV9-49A0A0B4J1Y8 123 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 IGLV2-11P01706 119 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 ODF1Q14990 250 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 TET1Q8NFU7 2136 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 TEX49A0A1B0GTD5 131 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 NCKAP5O14513 1909 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 FAM19A5Q7Z5A7 132 aaPredicted RBP9.23□□□□□ -0.93
TRIM27-205ENST00000481474 SPG11Q96JI7 2443 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 HLA-DMBP28068 263 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 HEPN1Q6WQI6 88 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 DEFB125Q8N687 156 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 HS3ST6Q96QI5 342 aa9.23□□□□□ -0.93
TRIM27-205ENST00000481474 IGKV1D-8A0A087WSZ0 117 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 IFITM3Q01628 133 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 GATA1P15976 413 aaPredicted RBP9.22□□□□□ -0.93
TRIM27-205ENST00000481474 CSRP3P50461 194 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 TRBV5-5A0A0J9YX44 114 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 PIN1P1O15428 100 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 ZFP36L1Q07352 338 aaKnown RBP9.22□□□□□ -0.93
TRIM27-205ENST00000481474 TNRC6BQ9UPQ9 1833 aaKnown RBP9.22□□□□□ -0.93
TRIM27-205ENST00000481474 LTAP01374 205 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 Q9H8V8 135 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 PRYO14603 147 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 CXCL1P09341 107 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 CARD19Q96LW7 228 aa9.22□□□□□ -0.93
TRIM27-205ENST00000481474 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.93
TRIM27-205ENST00000481474 SLAQ13239 276 aa9.21□□□□□ -0.93
TRIM27-205ENST00000481474 ORMDL1Q9P0S3 153 aa9.21□□□□□ -0.93
TRIM27-205ENST00000481474 ARAP2Q8WZ64 1704 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 LIMS1P48059 325 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 Q8N9W7 124 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 IL17DQ8TAD2 202 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 AGMATQ9BSE5 352 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BKO60814 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BJP06899 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BOP23527 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BBP33778 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BDP58876 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BCP62807 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST2H2BEQ16778 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BHQ93079 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BNQ99877 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BMQ99879 126 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 RTBDNQ9BSG5 229 aaPredicted RBP9.21□□□□□ -0.94
TRIM27-205ENST00000481474 ADAMTS7Q9UKP4 1686 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 SMIM27A0A1W2PRY6 76 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 WIPF3A6NGB9 483 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 UBE2V1Q13404 147 aa9.21□□□□□ -0.94
TRIM27-205ENST00000481474 GBF1Q92538 1859 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 CYTL1Q9NRR1 136 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 A0A087WV48 116 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 LINC01549A6NIU2 74 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 KIR2DL5BQ8NHK3 375 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 VPREB3Q9UKI3 123 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 LY96Q9Y6Y9 160 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 HIST1H2BLQ99880 126 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 HGFACQ04756 655 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 FHL1Q13642 323 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 Q6ZWC4 215 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 IGLL1P15814 213 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 ZNF491Q8N8L2 437 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 PLXNA1Q9UIW2 1896 aa9.2□□□□□ -0.94
TRIM27-205ENST00000481474 IGF1P05019 195 aa9.19□□□□□ -0.94
TRIM27-205ENST00000481474 IFITM2Q01629 132 aa9.19□□□□□ -0.94
TRIM27-205ENST00000481474 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
TRIM27-205ENST00000481474 PLCH1Q4KWH8 1693 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms