RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PAXXQ9BUH6 204 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 MRPL32Q9BYC8 188 aaKnown RBP10.53□□□□□ -0.72
LIMS3-203ENST00000480744 KRTAP4-5Q9BYR2 181 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 KCNIP2Q9NS61 270 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 MRPL16Q9NX20 251 aaKnown RBP10.53□□□□□ -0.72
LIMS3-203ENST00000480744 TP53TG3Q9ULZ0 132 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 TNFSF18Q9UNG2 199 aa10.53□□□□□ -0.72
LIMS3-203ENST00000480744 IGHV1OR15-1A0A075B7D0 117 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 OR7C2O60412 319 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 SPINK4O60575 86 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 IGHV3-53P01767 116 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 Q6ZQT7 251 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 ZFAND2AQ8N6M9 145 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 Q8TAT8 98 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 PHYHIPLQ96FC7 376 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 ZNF492Q9P255 531 aa10.52□□□□□ -0.73
LIMS3-203ENST00000480744 HSPG2P98160 4391 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 A0A1W2PPQ1 181 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 C17orf112F2Z3M2 114 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 NMBP08949 121 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 ZNF138P52744 262 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 IBA57Q5T440 356 aaKnown RBP10.51□□□□□ -0.73
LIMS3-203ENST00000480744 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 C18orf15Q96N68 181 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 LRP1BQ9NZR2 4599 aa10.51□□□□□ -0.73
LIMS3-203ENST00000480744 PAX4O43316 350 aa10.5□□□□□ -0.73
LIMS3-203ENST00000480744 CDK2AP2O75956 126 aa10.5□□□□□ -0.73
LIMS3-203ENST00000480744 CSN1S1P47710 185 aa10.5□□□□□ -0.73
LIMS3-203ENST00000480744 Q6ZNX1 250 aa10.5□□□□□ -0.73
LIMS3-203ENST00000480744 MAPKAPK5-AS1Q8N8E1 139 aa10.5□□□□□ -0.73
LIMS3-203ENST00000480744 ICOSQ9Y6W8 199 aa10.5□□□□□ -0.73
LIMS3-203ENST00000480744 EIF3GO75821 320 aaKnown RBP eCLIP10.49□□□□□ -0.73
LIMS3-203ENST00000480744 IFNA5P01569 189 aa10.49□□□□□ -0.73
LIMS3-203ENST00000480744 RANP62826 216 aaKnown RBP10.49□□□□□ -0.73
LIMS3-203ENST00000480744 UBE2L3P68036 154 aaKnown RBP10.49□□□□□ -0.73
LIMS3-203ENST00000480744 ZNF415Q09FC8 603 aa10.49□□□□□ -0.73
LIMS3-203ENST00000480744 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
LIMS3-203ENST00000480744 OR11H4Q8NGC9 324 aa10.49□□□□□ -0.73
LIMS3-203ENST00000480744 ST6GAL2Q96JF0 529 aa10.49□□□□□ -0.73
LIMS3-203ENST00000480744 LINC00315P59091 139 aa10.48□□□□□ -0.73
LIMS3-203ENST00000480744 FFAR4Q5NUL3 377 aa10.48□□□□□ -0.73
LIMS3-203ENST00000480744 SCGB1C1Q8TD33 95 aa10.48□□□□□ -0.73
LIMS3-203ENST00000480744 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
LIMS3-203ENST00000480744 SIVA1O15304 175 aa10.47□□□□□ -0.73
LIMS3-203ENST00000480744 NXPH4O95158 308 aa10.47□□□□□ -0.73
LIMS3-203ENST00000480744 KRTAP10-2P60368 255 aa10.47□□□□□ -0.73
LIMS3-203ENST00000480744 RPL7L1Q6DKI1 246 aaKnown RBP10.47□□□□□ -0.73
LIMS3-203ENST00000480744 HSD17B11Q8NBQ5 300 aa10.47□□□□□ -0.73
LIMS3-203ENST00000480744 INO80EQ8NBZ0 244 aaPredicted RBP10.47□□□□□ -0.73
LIMS3-203ENST00000480744 SH3BGRL3Q9H299 93 aa10.47□□□□□ -0.73
LIMS3-203ENST00000480744 PRO0255Q9UI72 69 aa10.47□□□□□ -0.73
LIMS3-203ENST00000480744 TRBV7-9A0A0J9YWB2 115 aa10.46□□□□□ -0.73
LIMS3-203ENST00000480744 ARPC5O15511 151 aa10.46□□□□□ -0.73
LIMS3-203ENST00000480744 RAB2AP61019 212 aa10.46□□□□□ -0.73
LIMS3-203ENST00000480744 ZNF266Q14584 549 aa10.46□□□□□ -0.73
LIMS3-203ENST00000480744 KHDC3LQ587J8 217 aa10.46□□□□□ -0.73
LIMS3-203ENST00000480744 RPH3ALQ9UNE2 315 aa10.46□□□□□ -0.73
LIMS3-203ENST00000480744 HHLA3Q9XRX5 114 aa10.46□□□□□ -0.73
LIMS3-203ENST00000480744 TRGV4A0A0C4DH28 118 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 BTF3P20290 206 aaKnown RBP10.45□□□□□ -0.74
LIMS3-203ENST00000480744 ATP6V0CP27449 155 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 CRYBA4P53673 196 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 TAS2R45P59539 299 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 SLAQ13239 276 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 FHL2Q14192 279 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 TMEM183BQ1AE95 376 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 TMEM183AQ8IXX5 376 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 LYPD1Q8N2G4 141 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 HYLS1Q96M11 299 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 CYTL1Q9NRR1 136 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 MDFICQ9P1T7 246 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 NAGKQ9UJ70 344 aa10.45□□□□□ -0.74
LIMS3-203ENST00000480744 hCG_2014768A0A024R1R8 64 aa10.44□□□□□ -0.74
LIMS3-203ENST00000480744 DIRC3C9JPN6 131 aa10.44□□□□□ -0.74
LIMS3-203ENST00000480744 SFTA3P0C7M3 94 aa10.44□□□□□ -0.74
LIMS3-203ENST00000480744 MRPL23Q16540 153 aaKnown RBP10.44□□□□□ -0.74
LIMS3-203ENST00000480744 FAM159AQ6UWV7 190 aa10.44□□□□□ -0.74
LIMS3-203ENST00000480744 APOBP04114 4563 aaKnown RBP10.44□□□□□ -0.74
LIMS3-203ENST00000480744 LYPD5Q6UWN5 251 aa10.43□□□□□ -0.74
LIMS3-203ENST00000480744 OR2G3Q8NGZ4 309 aa10.43□□□□□ -0.74
LIMS3-203ENST00000480744 CMTM2Q8TAZ6 248 aa10.43□□□□□ -0.74
LIMS3-203ENST00000480744 DNAH5Q8TE73 4624 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 TRGV11A0A075B6L2 103 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 A0A1B0GVG6 124 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 PGPA6NDG6 321 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 SRIP30626 198 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 Q6AWC8 147 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 NEGR1Q7Z3B1 354 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 PCNPQ8WW12 178 aaKnown RBP10.42□□□□□ -0.74
LIMS3-203ENST00000480744 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 PSMG3Q9BT73 122 aaPredicted RBP10.42□□□□□ -0.74
LIMS3-203ENST00000480744 OTORQ9NRC9 128 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 LENEPQ9Y5L5 61 aa10.42□□□□□ -0.74
LIMS3-203ENST00000480744 EREGO14944 169 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 HMGB3O15347 200 aaKnown RBP10.41□□□□□ -0.74
LIMS3-203ENST00000480744 ZNF345Q14585 488 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 ACOT6Q3I5F7 207 aaPredicted RBP10.41□□□□□ -0.74
LIMS3-203ENST00000480744 FAM74A1Q5RGS3 127 aa10.41□□□□□ -0.74
LIMS3-203ENST00000480744 Q6ZRN7 208 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms