RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 A0A1B0GVY2 172 aa8□□□□□ -1.13
CCM2-213ENST00000480658 K7EP13 123 aa8□□□□□ -1.13
CCM2-213ENST00000480658 SERF2P84101 59 aa8□□□□□ -1.13
CCM2-213ENST00000480658 Q6AWC8 147 aa8□□□□□ -1.13
CCM2-213ENST00000480658 C6orf223Q8N319 242 aa8□□□□□ -1.13
CCM2-213ENST00000480658 ZFAND2AQ8N6M9 145 aa8□□□□□ -1.13
CCM2-213ENST00000480658 INO80EQ8NBZ0 244 aaPredicted RBP8□□□□□ -1.13
CCM2-213ENST00000480658 OR2G3Q8NGZ4 309 aa8□□□□□ -1.13
CCM2-213ENST00000480658 VGLL1Q99990 258 aa8□□□□□ -1.13
CCM2-213ENST00000480658 SPXQ9BT56 116 aa8□□□□□ -1.13
CCM2-213ENST00000480658 NDFIP1Q9BT67 221 aa8□□□□□ -1.13
CCM2-213ENST00000480658 MED28Q9H204 178 aa8□□□□□ -1.13
CCM2-213ENST00000480658 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
CCM2-213ENST00000480658 GSN-AS1Q9NRJ2 163 aa8□□□□□ -1.13
CCM2-213ENST00000480658 KLF12Q9Y4X4 402 aa8□□□□□ -1.13
CCM2-213ENST00000480658 VPS13DQ5THJ4 4388 aa8□□□□□ -1.13
CCM2-213ENST00000480658 DIRC3C9JPN6 131 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 CD300CQ08708 224 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 Q6ZTI0 123 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 OR10G4Q8NGN3 311 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 OR10G9Q8NGN4 311 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 OR10G7Q8NGN6 311 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 KCNS1Q96KK3 526 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 AQP10Q96PS8 301 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 SMIM3Q9BZL3 60 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 Q9H8V8 135 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 PRO0255Q9UI72 69 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 TP53TG3Q9ULZ0 132 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 MRPS16Q9Y3D3 137 aaKnown RBP7.99□□□□□ -1.13
CCM2-213ENST00000480658 LINC00588Q9Y4M8 146 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 ICOSQ9Y6W8 199 aa7.99□□□□□ -1.13
CCM2-213ENST00000480658 TRAV21A0A0B4J279 112 aa7.98□□□□□ -1.13
CCM2-213ENST00000480658 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
CCM2-213ENST00000480658 TDRG1Q3Y452 100 aa7.98□□□□□ -1.13
CCM2-213ENST00000480658 ZFP69Q49AA0 526 aa7.98□□□□□ -1.13
CCM2-213ENST00000480658 TMEM167BQ9NRX6 74 aa7.98□□□□□ -1.13
CCM2-213ENST00000480658 ALG5Q9Y673 324 aa7.98□□□□□ -1.13
CCM2-213ENST00000480658 BORCS7-ASMTA0A0B4J1R7 106 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 CIDEAO60543 219 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 ORM1P02763 201 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 GIPP09681 153 aaPredicted RBP7.97□□□□□ -1.13
CCM2-213ENST00000480658 PRB4P10163 310 aaPredicted RBP7.97□□□□□ -1.13
CCM2-213ENST00000480658 HOXA5P20719 270 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 SH2D6Q7Z4S9 175 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 C5orf17Q8NAS9 161 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 Q8TAT8 98 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 PCNPQ8WW12 178 aaKnown RBP7.97□□□□□ -1.13
CCM2-213ENST00000480658 HYLS1Q96M11 299 aa7.97□□□□□ -1.13
CCM2-213ENST00000480658 A0A0J9YY99 117 aa7.96□□□□□ -1.14
CCM2-213ENST00000480658 PGPA6NDG6 321 aa7.96□□□□□ -1.14
CCM2-213ENST00000480658 PAX4O43316 350 aa7.96□□□□□ -1.14
CCM2-213ENST00000480658 CXorf1O96002 111 aa7.96□□□□□ -1.14
CCM2-213ENST00000480658 MRPL23Q16540 153 aaKnown RBP7.96□□□□□ -1.14
CCM2-213ENST00000480658 IQCF2Q8IXL9 164 aa7.96□□□□□ -1.14
CCM2-213ENST00000480658 NKX6-2Q9C056 277 aaPredicted RBP7.96□□□□□ -1.14
CCM2-213ENST00000480658 TNFSF18Q9UNG2 199 aa7.96□□□□□ -1.14
CCM2-213ENST00000480658 TRAV9-2A0A087WT02 112 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 TRGV4A0A0C4DH28 118 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 C9JCJ5 164 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 STAG3L2P0CL84 134 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 STAG3L3P0CL85 134 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 RASL10AQ92737 203 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 TXNDC17Q9BRA2 123 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 ACTR3CQ9C0K3 210 aaPredicted RBP7.95□□□□□ -1.14
CCM2-213ENST00000480658 SDF2L1Q9HCN8 221 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 TREM1Q9NP99 234 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 HHLA3Q9XRX5 114 aa7.95□□□□□ -1.14
CCM2-213ENST00000480658 A0A096LPF7 62 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 TAAR5O14804 337 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 ARL14EPLP0DKL9 152 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 PPT1P50897 306 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 RAB2AP61019 212 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 PRR9Q5T870 116 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 GOLT1AQ6ZVE7 132 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 NFE4Q86UQ8 179 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 HSD17B11Q8NBQ5 300 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 SH3BGRL3Q9H299 93 aa7.94□□□□□ -1.14
CCM2-213ENST00000480658 DNAH10Q8IVF4 4471 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 TRAV4A0A0B4J268 109 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 M0R2P5 195 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 SIVA1O15304 175 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 SRIP30626 198 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 CRYBA4P53673 196 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 TMEM183BQ1AE95 376 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 ESRGQ1W209 222 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 RGS21Q2M5E4 152 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 SAPCD1Q5SSQ6 148 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 NEGR1Q7Z3B1 354 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 TMEM183AQ8IXX5 376 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 SUN5Q8TC36 379 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 VSIG2Q96IQ7 327 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 TCEAL7Q9BRU2 100 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 MRPL16Q9NX20 251 aaKnown RBP7.93□□□□□ -1.14
CCM2-213ENST00000480658 NAGKQ9UJ70 344 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 RPH3ALQ9UNE2 315 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 NACAE9PAV3 2078 aa7.93□□□□□ -1.14
CCM2-213ENST00000480658 EREGO14944 169 aa7.92□□□□□ -1.14
CCM2-213ENST00000480658 TCRAP04437 139 aa7.92□□□□□ -1.14
CCM2-213ENST00000480658 ATP6V0CP27449 155 aa7.92□□□□□ -1.14
CCM2-213ENST00000480658 MUC21Q5SSG8 566 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms