RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 TRAV34A0A0B4J273 112 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 TRBV7-9A0A0J9YWB2 115 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 IGLV2-11P01706 119 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 NMBP08949 121 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 FLI1Q01543 452 aaPredicted RBP10.85□□□□□ -0.67
ABCF3-213ENST00000480539 PRNTQ86SH4 94 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 NDFIP1Q9BT67 221 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 TREM1Q9NP99 234 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 PSG8Q9UQ74 426 aa10.85□□□□□ -0.67
ABCF3-213ENST00000480539 TRAV1-1A0A0B4J248 108 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 TEX46H3BTG2 121 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 ZNF324O75467 553 aaPredicted RBP10.84□□□□□ -0.67
ABCF3-213ENST00000480539 PPT1P50897 306 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 FAM222AQ5U5X8 452 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 Q86TA4 180 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 CCDC28AQ8IWP9 274 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 RNASE8Q8TDE3 154 aaKnown RBP10.84□□□□□ -0.67
ABCF3-213ENST00000480539 HIST1H2BAQ96A08 127 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 C16orf74Q96GX8 76 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 C8orf49Q96NF6 230 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 PYGO2Q9BRQ0 406 aa10.84□□□□□ -0.67
ABCF3-213ENST00000480539 SCO2A0A1W2PP80 73 aa10.83□□□□□ -0.68
ABCF3-213ENST00000480539 PLAC8L1A1L4L8 177 aa10.83□□□□□ -0.68
ABCF3-213ENST00000480539 C11orf94C9JXX5 98 aa10.83□□□□□ -0.68
ABCF3-213ENST00000480539 Q6ZTC4 211 aa10.83□□□□□ -0.68
ABCF3-213ENST00000480539 TMEM263Q8WUH6 116 aaKnown RBP10.83□□□□□ -0.68
ABCF3-213ENST00000480539 MANBALQ9NQG1 85 aa10.83□□□□□ -0.68
ABCF3-213ENST00000480539 DKK2Q9UBU2 259 aa10.83□□□□□ -0.68
ABCF3-213ENST00000480539 RGS13O14921 159 aa10.82□□□□□ -0.68
ABCF3-213ENST00000480539 SPART-AS1P0CW21 52 aa10.82□□□□□ -0.68
ABCF3-213ENST00000480539 AKR1C3P42330 323 aa10.82□□□□□ -0.68
ABCF3-213ENST00000480539 C12orf74Q32Q52 190 aa10.82□□□□□ -0.68
ABCF3-213ENST00000480539 MUC21Q5SSG8 566 aa10.82□□□□□ -0.68
ABCF3-213ENST00000480539 Q6AWC8 147 aa10.82□□□□□ -0.68
ABCF3-213ENST00000480539 PHLDA1Q8WV24 401 aaPredicted RBP10.82□□□□□ -0.68
ABCF3-213ENST00000480539 TCEAL7Q9BRU2 100 aa10.82□□□□□ -0.68
ABCF3-213ENST00000480539 IGHV1OR15-1A0A075B7D0 117 aa10.81□□□□□ -0.68
ABCF3-213ENST00000480539 TEX48A0A1B0GUV7 120 aa10.81□□□□□ -0.68
ABCF3-213ENST00000480539 CBY3A6NI87 242 aa10.81□□□□□ -0.68
ABCF3-213ENST00000480539 UBE2G1P62253 170 aa10.81□□□□□ -0.68
ABCF3-213ENST00000480539 EIF4E3Q8N5X7 224 aaKnown RBP10.81□□□□□ -0.68
ABCF3-213ENST00000480539 NAGKQ9UJ70 344 aa10.81□□□□□ -0.68
ABCF3-213ENST00000480539 TP53TG3Q9ULZ0 132 aa10.81□□□□□ -0.68
ABCF3-213ENST00000480539 NUPR2A6NF83 97 aa10.8□□□□□ -0.68
ABCF3-213ENST00000480539 FBLL1A6NHQ2 334 aaKnown RBP10.8□□□□□ -0.68
ABCF3-213ENST00000480539 GCGP01275 180 aa10.8□□□□□ -0.68
ABCF3-213ENST00000480539 IFNA1P01562 189 aa10.8□□□□□ -0.68
ABCF3-213ENST00000480539 ZNF493Q6ZR52 646 aa10.8□□□□□ -0.68
ABCF3-213ENST00000480539 FMC1Q96HJ9 113 aa10.8□□□□□ -0.68
ABCF3-213ENST00000480539 LINC00467Q9BRT7 94 aa10.8□□□□□ -0.68
ABCF3-213ENST00000480539 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
ABCF3-213ENST00000480539 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 LYRM9A8MSI8 78 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 SNURFLB1AK76 121 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 ZNF80P51504 273 aaPredicted RBP10.79□□□□□ -0.68
ABCF3-213ENST00000480539 DAD1P61803 113 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 BLOC1S1P78537 153 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 SMUG1Q53HV7 270 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 ZNF680Q8NEM1 530 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 C2CD4CQ8TF44 421 aa10.79□□□□□ -0.68
ABCF3-213ENST00000480539 TIMM8BQ9Y5J9 83 aaPredicted RBP10.79□□□□□ -0.68
ABCF3-213ENST00000480539 DYNC2H1Q8NCM8 4307 aaKnown RBP10.79□□□□□ -0.68
ABCF3-213ENST00000480539 DEFB130BP0DP73 79 aa10.78□□□□□ -0.68
ABCF3-213ENST00000480539 DEFB130AP0DP74 79 aa10.78□□□□□ -0.68
ABCF3-213ENST00000480539 BCL2P10415 239 aa10.78□□□□□ -0.68
ABCF3-213ENST00000480539 ANXA2RQ3ZCQ2 193 aa10.78□□□□□ -0.68
ABCF3-213ENST00000480539 SAPCD1Q5SSQ6 148 aa10.78□□□□□ -0.68
ABCF3-213ENST00000480539 CEMP1Q6PRD7 247 aaPredicted RBP10.78□□□□□ -0.68
ABCF3-213ENST00000480539 C11orf72Q8NBR9 251 aa10.78□□□□□ -0.68
ABCF3-213ENST00000480539 GSN-AS1Q9NRJ2 163 aa10.78□□□□□ -0.68
ABCF3-213ENST00000480539 TRAV10A0A0B4J240 114 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 HTN3P15516 51 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 MEF2BQ02080 365 aaPredicted RBP10.77□□□□□ -0.69
ABCF3-213ENST00000480539 TMEM183BQ1AE95 376 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 FAM159AQ6UWV7 190 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 TMEM183AQ8IXX5 376 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 NHLRC2Q8NBF2 726 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 DERL1Q9BUN8 251 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.69
ABCF3-213ENST00000480539 LTAP01374 205 aa10.76□□□□□ -0.69
ABCF3-213ENST00000480539 PFN1P07737 140 aaKnown RBP10.76□□□□□ -0.69
ABCF3-213ENST00000480539 ZNF415Q09FC8 603 aa10.76□□□□□ -0.69
ABCF3-213ENST00000480539 PCNPQ8WW12 178 aaKnown RBP10.76□□□□□ -0.69
ABCF3-213ENST00000480539 ZC2HC1AQ96GY0 325 aa10.76□□□□□ -0.69
ABCF3-213ENST00000480539 C11orf21Q9P2W6 132 aa10.76□□□□□ -0.69
ABCF3-213ENST00000480539 TRGV11A0A075B6L2 103 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 TRBV6-1A0A0K0K1D8 114 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 TCL1AP56279 114 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 IBA57Q5T440 356 aaKnown RBP10.75□□□□□ -0.69
ABCF3-213ENST00000480539 TEX261Q6UWH6 196 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 C11orf52Q96A22 123 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 VAX2Q9UIW0 290 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 ZFP30Q9Y2G7 519 aa10.75□□□□□ -0.69
ABCF3-213ENST00000480539 KLK5Q9Y337 293 aaPredicted RBP10.75□□□□□ -0.69
ABCF3-213ENST00000480539 PLECQ15149 4684 aaKnown RBP10.75□□□□□ -0.69
ABCF3-213ENST00000480539 GAGE12BA1L429 117 aa10.74□□□□□ -0.69
ABCF3-213ENST00000480539 GAGE7O76087 117 aa10.74□□□□□ -0.69
ABCF3-213ENST00000480539 TYMSP04818 313 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms