RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 IGLC1P0CG04 106 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 DAD1P61803 113 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 PRO1854Q9UHT4 67 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 IGHV2-70DA0A0C4DH43 119 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 HOXD3P31249 432 aaPredicted RBP10.85□□□□□ -0.67
MCF2L-225ENST00000480321 ANXA2RQ3ZCQ2 193 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 PRSS57Q6UWY2 283 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 RBAKDNA6NC62 111 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 WIPF3A6NGB9 483 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 H3BUA1 57 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 ZC2HC1AQ96GY0 325 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 TCF20Q9UGU0 1960 aaKnown RBP10.85□□□□□ -0.67
MCF2L-225ENST00000480321 KIR2DL5BA0A0G2JN68 375 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 KIR2DL5BA0A0G2JPC4 375 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 Q6ZSR3 168 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 KIR2DL5AQ8N109 375 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 MRAPQ8TCY5 172 aa10.85□□□□□ -0.67
MCF2L-225ENST00000480321 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
MCF2L-225ENST00000480321 NLRC5Q86WI3 1866 aa10.84□□□□□ -0.67
MCF2L-225ENST00000480321 DKK1O94907 266 aa10.84□□□□□ -0.67
MCF2L-225ENST00000480321 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
MCF2L-225ENST00000480321 HLA-DMBP28068 263 aa10.84□□□□□ -0.67
MCF2L-225ENST00000480321 FER1L5A0AVI2 2057 aa10.84□□□□□ -0.67
MCF2L-225ENST00000480321 HEATR1Q9H583 2144 aaKnown RBP10.83□□□□□ -0.68
MCF2L-225ENST00000480321 NPYP01303 97 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 CR1LQ2VPA4 569 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 J3QKU1 62 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 IFITM1P13164 125 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 LINC01545Q5VT33 79 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 KNCNA6PVL3 124 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 MRPL35Q9NZE8 188 aaKnown RBP10.83□□□□□ -0.68
MCF2L-225ENST00000480321 LY6G6EA0A0G2JKS1 128 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 CDKN1BP46527 198 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 ZNF493Q6ZR52 646 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 SLX1AQ9BQ83 275 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 U3KQA8 63 aa10.83□□□□□ -0.68
MCF2L-225ENST00000480321 K7EN84 100 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 SPINK13Q1W4C9 94 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 G3V318 75 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 NDUFS7O75251 213 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 RBMY1FQ15415 496 aaKnown RBP10.82□□□□□ -0.68
MCF2L-225ENST00000480321 NBASA2RRP1 2371 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 TRAV13-2A0A0B4J235 113 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 IGLC7A0M8Q6 106 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 NDUFA12Q9UI09 145 aa10.82□□□□□ -0.68
MCF2L-225ENST00000480321 SHISA9B4DS77 424 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 FGF6P10767 208 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 RHOHQ15669 191 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 GAGE12JA6NER3 117 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 ZNF134P52741 427 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 GAGE4Q13068 117 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 GAGE5Q13069 117 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 ZNF524Q96C55 264 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 ROS1P08922 2347 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 ZNF747Q9BV97 191 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 ZNF503-AS2A6NEH8 195 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 J3QLI3 93 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 HERVK_113P63121 156 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 ATP6V0BQ99437 205 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 TRACP01848 142 aa10.81□□□□□ -0.68
MCF2L-225ENST00000480321 ETDBQ3ZM63 59 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 TMEM243Q9BU79 118 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 KLK9Q9UKQ9 250 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 KRTAP27-1Q3LI81 207 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 MORN5Q5VZ52 161 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 UBL5Q9BZL1 73 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 IGHV3-16A0A0C4DH30 117 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 GAGE12HA6NDE8 117 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 J3QQQ9 107 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 WISP1O95388 367 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
MCF2L-225ENST00000480321 ZNF491Q8N8L2 437 aa10.79□□□□□ -0.68
MCF2L-225ENST00000480321 RNF138Q8WVD3 245 aa10.79□□□□□ -0.68
MCF2L-225ENST00000480321 COL4A6Q14031 1691 aa10.79□□□□□ -0.68
MCF2L-225ENST00000480321 AZU1P20160 251 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 IGHV7-4-1A0A0J9YVY3 117 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 IGHG4P01861 327 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 C12orf74Q32Q52 190 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 DEFB125Q8N687 156 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 TCTEX1D4Q5JR98 221 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 ZMAT4Q9H898 229 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 DUX4L9Q6RFH8 374 aaPredicted RBP10.78□□□□□ -0.68
MCF2L-225ENST00000480321 PI4KAP42356 2102 aa10.78□□□□□ -0.68
MCF2L-225ENST00000480321 APOC4P55056 127 aa10.77□□□□□ -0.68
MCF2L-225ENST00000480321 DOCK7Q96N67 2140 aa10.77□□□□□ -0.68
MCF2L-225ENST00000480321 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.68
MCF2L-225ENST00000480321 TPSG1Q9NRR2 321 aa10.77□□□□□ -0.68
MCF2L-225ENST00000480321 TRAV26-2A0A0B4J265 109 aa10.77□□□□□ -0.69
MCF2L-225ENST00000480321 PFN2P35080 140 aa10.77□□□□□ -0.69
MCF2L-225ENST00000480321 GAGE7O76087 117 aa10.77□□□□□ -0.69
MCF2L-225ENST00000480321 GAGE12FP0CL80 117 aa10.77□□□□□ -0.69
MCF2L-225ENST00000480321 GAGE12GP0CL81 117 aa10.77□□□□□ -0.69
MCF2L-225ENST00000480321 GAGE12IP0CL82 117 aa10.77□□□□□ -0.69
MCF2L-225ENST00000480321 PHF3Q92576 2039 aaKnown RBP10.76□□□□□ -0.69
MCF2L-225ENST00000480321 PLA2G2CQ5R387 149 aa10.76□□□□□ -0.69
MCF2L-225ENST00000480321 KIAA2026Q5HYC2 2103 aa10.76□□□□□ -0.69
MCF2L-225ENST00000480321 HAMPP81172 84 aa10.76□□□□□ -0.69
MCF2L-225ENST00000480321 K7ERJ3 54 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms