RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 TP53TG1Q9Y2A0 90 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 NOTCH1P46531 2555 aa8.6□□□□□ -1.03
TRAPPC12-219ENST00000479955 TRAV21A0A0B4J279 112 aa8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 ZNF727A8MUV8 499 aa8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 RNASE4P34096 147 aaKnown RBP8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 CENPWQ5EE01 88 aa8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 SOHLH1Q5JUK2 328 aa8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 COMMD7Q86VX2 200 aa8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 ZFAND2AQ8N6M9 145 aa8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 SMIM7Q9BQ49 75 aa8.59□□□□□ -1.03
TRAPPC12-219ENST00000479955 TRAV12-2A0A075B6T6 113 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 SMIM9A6NGZ8 99 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 FABP5P3A8MUU1 101 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 H7BYZ3 331 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 J3KRW8 73 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 CRXO43186 299 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 SPRY2O43597 315 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 GCGP01275 180 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 GIG44P09565 113 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 NHLRC4P0CG21 123 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 SRSF3P84103 164 aaKnown RBP8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 NDUFA5Q16718 116 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 GFI1BQ5VTD9 330 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 Q6AWC8 147 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 CSNK1G2-AS1Q8NCQ2 148 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 RNF183Q96D59 192 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 TVP23CQ96ET8 276 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 ZMAT4Q9H898 229 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 LY96Q9Y6Y9 160 aa8.58□□□□□ -1.04
TRAPPC12-219ENST00000479955 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 C9JQL5 133 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 PFN1P07737 140 aaKnown RBP8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 TMEM241Q24JQ0 296 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 SBSPONQ8IVN8 264 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 C8orf49Q96NF6 230 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 LINC01587Q99440 93 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 MLST8Q9BVC4 326 aa8.57□□□□□ -1.04
TRAPPC12-219ENST00000479955 ZNF324O75467 553 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 SFTA3P0C7M3 94 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 BTN1A1Q13410 526 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 DEFB135Q30KP9 77 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 FAM162BQ5T6X4 162 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 FAM159AQ6UWV7 190 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 ZNF705AQ6ZN79 300 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 DAZAP1Q96EP5 407 aaKnown RBP8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 KCNS1Q96KK3 526 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 NEU1Q99519 415 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 TM2D3Q9BRN9 247 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 NAT8Q9UHE5 227 aa8.56□□□□□ -1.04
TRAPPC12-219ENST00000479955 IGHV3OR16-12A0A075B7B8 117 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 TMEM218A2RU14 115 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 MGST1P10620 155 aaKnown RBP8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 KIR3DS1Q14943 382 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 C1orf158Q8N1D5 194 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 OR11H2Q8NH07 326 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 OCC1Q8TAD7 63 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 ZC2HC1AQ96GY0 325 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 LINC00467Q9BRT7 94 aa8.55□□□□□ -1.04
TRAPPC12-219ENST00000479955 DNAH3Q8TD57 4116 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 TRBV20OR9-2A0A075B6H5 130 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 IGHV1OR15-1A0A075B7D0 117 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 IGLV2-8P01709 118 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 MIFP14174 115 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 ZNF80P51504 273 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 RRN3P1Q2M238 152 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 PRR9Q5T870 116 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 OVOL2Q9BRP0 275 aa8.54□□□□□ -1.04
TRAPPC12-219ENST00000479955 F8W036 122 aa8.53□□□□□ -1.04
TRAPPC12-219ENST00000479955 CRIP1P50238 77 aa8.53□□□□□ -1.04
TRAPPC12-219ENST00000479955 PNRC1Q12796 327 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC12-219ENST00000479955 TDRG1Q3Y452 100 aa8.53□□□□□ -1.04
TRAPPC12-219ENST00000479955 PRR27Q6MZM9 219 aa8.53□□□□□ -1.04
TRAPPC12-219ENST00000479955 ZNF493Q6ZR52 646 aa8.53□□□□□ -1.04
TRAPPC12-219ENST00000479955 LINC01551Q86U37 167 aa8.53□□□□□ -1.04
TRAPPC12-219ENST00000479955 TRGV11A0A075B6L2 103 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 TMEM189A5PLL7 270 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 PGPEP1LA6NFU8 196 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 CBY3A6NI87 242 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 SH2D1AO60880 128 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 ORM1P02763 201 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 RBMY1A1P0DJD3 496 aaKnown RBP8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 RBMY1CP0DJD4 496 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 HTN1P15515 57 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 RBMY1FQ15415 496 aaKnown RBP8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 ANXA2RQ3ZCQ2 193 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 SEC11CQ9BY50 192 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 SDF2L1Q9HCN8 221 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 NAGKQ9UJ70 344 aa8.52□□□□□ -1.05
TRAPPC12-219ENST00000479955 XKRY2A2RUG3 117 aa8.51□□□□□ -1.05
TRAPPC12-219ENST00000479955 P01737 135 aa8.51□□□□□ -1.05
TRAPPC12-219ENST00000479955 ERVFC1-1P60608 527 aa8.51□□□□□ -1.05
TRAPPC12-219ENST00000479955 RPS20P60866 119 aaKnown RBP8.51□□□□□ -1.05
TRAPPC12-219ENST00000479955 MUC21Q5SSG8 566 aa8.51□□□□□ -1.05
TRAPPC12-219ENST00000479955 IBA57Q5T440 356 aaKnown RBP8.51□□□□□ -1.05
TRAPPC12-219ENST00000479955 FAM231DQ6ZW35 169 aa8.51□□□□□ -1.05
TRAPPC12-219ENST00000479955 C15orf54Q8N8G6 183 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms