RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 LINC00476Q8WZB0 136 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 TMPRSS5Q9H3S3 457 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 SELENOKQ9Y6D0 94 aa6.45□□□□□ -1.38
DDX56-211ENST00000479602 DNAH11Q96DT5 4516 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 TEX48A0A1B0GUV7 120 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 TMEM189A5PLL7 270 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 C9JCJ5 164 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 C11orf94C9JXX5 98 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 H7BYZ3 331 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 PAGE4O60829 102 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 TAS2R60P59551 318 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 CCL20P78556 96 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 FLI1Q01543 452 aaPredicted RBP6.44□□□□□ -1.38
DDX56-211ENST00000479602 CLLU1Q5K131 121 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 IGFL4Q6B9Z1 124 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 ZNF493Q6ZR52 646 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 PYGO2Q9BRQ0 406 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 NDUFAF3Q9BU61 184 aa6.44□□□□□ -1.38
DDX56-211ENST00000479602 DYNC1H1Q14204 4646 aaKnown RBP6.44□□□□□ -1.38
DDX56-211ENST00000479602 C7orf71A4D174 169 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 SPRY2O43597 315 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 ZNF324O75467 553 aaPredicted RBP6.43□□□□□ -1.38
DDX56-211ENST00000479602 CXCL1P09341 107 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 ANXA2RQ3ZCQ2 193 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 GFI1BQ5VTD9 330 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 GOLT1AQ6ZVE7 132 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 Q86TA4 180 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 OR4B1Q8NGF8 309 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 VGLL1Q99990 258 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 NDFIP1Q9BT67 221 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 MLST8Q9BVC4 326 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 SLC35B3Q9H1N7 401 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 GOLT1BQ9Y3E0 138 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 LY96Q9Y6Y9 160 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 X6R8D5 127 aa6.43□□□□□ -1.38
DDX56-211ENST00000479602 PKHD1P08F94 4074 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 IGKV2-40A0A087WW87 121 aaPredicted RBP6.42□□□□□ -1.38
DDX56-211ENST00000479602 RAB19A4D1S5 217 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 EIF3GO75821 320 aaKnown RBP eCLIP6.42□□□□□ -1.38
DDX56-211ENST00000479602 IGKV2D-40P01614 121 aaPredicted RBP6.42□□□□□ -1.38
DDX56-211ENST00000479602 ATP5G3P48201 142 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 DEFB1P60022 68 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 IFITM2Q01629 132 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 DNLZQ5SXM8 178 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 IBA57Q5T440 356 aaKnown RBP6.42□□□□□ -1.38
DDX56-211ENST00000479602 CEMP1Q6PRD7 247 aaPredicted RBP6.42□□□□□ -1.38
DDX56-211ENST00000479602 TMEM183AQ8IXX5 376 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 C1orf158Q8N1D5 194 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 Q8NAQ8 132 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 C18orf15Q96N68 181 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 GNG13Q9P2W3 67 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 PSG8Q9UQ74 426 aa6.42□□□□□ -1.38
DDX56-211ENST00000479602 RBFOX3A6NFN3 312 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 PFN1P07737 140 aaKnown RBP6.41□□□□□ -1.38
DDX56-211ENST00000479602 SNRPCP09234 159 aaKnown RBP6.41□□□□□ -1.38
DDX56-211ENST00000479602 RPL35AP18077 110 aaKnown RBP6.41□□□□□ -1.38
DDX56-211ENST00000479602 UBE2G2P60604 165 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 SPINK13Q1W4C9 94 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 DEFB135Q30KP9 77 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 PIK3CD-AS1Q5SR53 167 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 CST9LP1Q5W188 147 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 IQCF2Q8IXL9 164 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 EIF4E3Q8N5X7 224 aaKnown RBP6.41□□□□□ -1.38
DDX56-211ENST00000479602 RNASE8Q8TDE3 154 aaKnown RBP6.41□□□□□ -1.38
DDX56-211ENST00000479602 TMEM263Q8WUH6 116 aaKnown RBP6.41□□□□□ -1.38
DDX56-211ENST00000479602 TVP23CQ96ET8 276 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 NIPSNAP3BQ9BS92 247 aa6.41□□□□□ -1.38
DDX56-211ENST00000479602 TRAV21A0A0B4J279 112 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 A0A0J9YWU9 116 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 SCO2A0A1W2PP80 73 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 M0R2Z0 102 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 GPX1P07203 203 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 RBMY1A1P0DJD3 496 aaKnown RBP6.4□□□□□ -1.38
DDX56-211ENST00000479602 RBMY1CP0DJD4 496 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 AKR1C3P42330 323 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 UBE2G1P62253 170 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 RBMY1FQ15415 496 aaKnown RBP6.4□□□□□ -1.38
DDX56-211ENST00000479602 ZNF674Q2M3X9 581 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 FAM74A3Q4VXF1 159 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 SMUG1Q53HV7 270 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 LINC00612Q8N6U2 182 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 PTH2Q96A98 100 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 C16orf74Q96GX8 76 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 KCNS1Q96KK3 526 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 TREM1Q9NP99 234 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 BIN3Q9NQY0 253 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 XCL2Q9UBD3 114 aa6.4□□□□□ -1.38
DDX56-211ENST00000479602 TRAV8-1A0A0A6YYK1 113 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 LYRM9A8MSI8 78 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 RPL35P42766 123 aaKnown RBP6.39□□□□□ -1.39
DDX56-211ENST00000479602 GNG5P63218 68 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
DDX56-211ENST00000479602 ERCC8Q13216 396 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 UQCC3Q6UW78 93 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 OR11H2Q8NH07 326 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 Q8TAT8 98 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 RARRES2Q99969 163 aa6.39□□□□□ -1.39
DDX56-211ENST00000479602 TRBV20OR9-2A0A075B6H5 130 aa6.38□□□□□ -1.39
DDX56-211ENST00000479602 IGHV1OR15-1A0A075B7D0 117 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms