RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	NDFIP1	Q9BT67	221 aa		12.94	□□□□□ -0.34
RFK-204	ENST00000479197	TREM1	Q9NP99	234 aa		12.94	□□□□□ -0.34
RFK-204	ENST00000479197	BLOC1S1	P78537	153 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	TVP23C	Q96ET8	276 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	LINC00479	Q96M42	142 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	PYGO2	Q9BRQ0	406 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	TRAV34	A0A0B4J273	112 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	C11orf94	C9JXX5	98 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	EMP1	P54849	157 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	PRNT	Q86SH4	94 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	C11orf45	Q8TAV5	145 aa		12.93	□□□□□ -0.34
RFK-204	ENST00000479197	IFNA1	P01562	189 aa		12.92	□□□□□ -0.34
RFK-204	ENST00000479197	AZU1	P20160	251 aa		12.92	□□□□□ -0.34
RFK-204	ENST00000479197	PMS2P11	Q13670	270 aa		12.92	□□□□□ -0.34
RFK-204	ENST00000479197		Q6AWC8	147 aa		12.91	□□□□□ -0.34
RFK-204	ENST00000479197		Q86TA4	180 aa		12.91	□□□□□ -0.34
RFK-204	ENST00000479197	TMEM263	Q8WUH6	116 aa	Known RBP	12.91	□□□□□ -0.34
RFK-204	ENST00000479197	C16orf74	Q96GX8	76 aa		12.91	□□□□□ -0.34
RFK-204	ENST00000479197	FMC1	Q96HJ9	113 aa		12.91	□□□□□ -0.34
RFK-204	ENST00000479197	SCO2	A0A1W2PP80	73 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	CXorf65	A6NEN9	183 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	C3orf84	H3BNL1	204 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	AKR1C3	P42330	323 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	SAPCD1	Q5SSQ6	148 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	TEX261	Q6UWH6	196 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197		Q6ZQT7	251 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	ZNF493	Q6ZR52	646 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	RNASE8	Q8TDE3	154 aa	Known RBP	12.9	□□□□□ -0.34
RFK-204	ENST00000479197	C8orf49	Q96NF6	230 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	TXNDC17	Q9BRA2	123 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	LINC00467	Q9BRT7	94 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	CELA1	Q9UNI1	258 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	CSMD3	Q7Z407	3707 aa		12.9	□□□□□ -0.34
RFK-204	ENST00000479197	PLAC8L1	A1L4L8	177 aa		12.89	□□□□□ -0.35
RFK-204	ENST00000479197	RGS13	O14921	159 aa		12.89	□□□□□ -0.35
RFK-204	ENST00000479197	BCL2	P10415	239 aa		12.89	□□□□□ -0.35
RFK-204	ENST00000479197	NANOS2	P60321	138 aa	Known RBP	12.89	□□□□□ -0.35
RFK-204	ENST00000479197	UBE2G1	P62253	170 aa		12.89	□□□□□ -0.35
RFK-204	ENST00000479197	LYPD6B	Q8NI32	183 aa		12.89	□□□□□ -0.35
RFK-204	ENST00000479197	KLF12	Q9Y4X4	402 aa		12.89	□□□□□ -0.35
RFK-204	ENST00000479197	STARD9	Q9P2P6	4700 aa		12.89	□□□□□ -0.35
RFK-204	ENST00000479197	TEX48	A0A1B0GUV7	120 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	SPART-AS1	P0CW21	52 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	EIF4E3	Q8N5X7	224 aa	Known RBP	12.88	□□□□□ -0.35
RFK-204	ENST00000479197	C2CD4C	Q8TF44	421 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	DKK2	Q9UBU2	259 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	IGHV1OR15-1	A0A075B7D0	117 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	TRAV21	A0A0B4J279	112 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	CBY3	A6NI87	242 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	TAGLN2	P37802	199 aa	Known RBP	12.88	□□□□□ -0.35
RFK-204	ENST00000479197	MEF2B	Q02080	365 aa	Predicted RBP	12.88	□□□□□ -0.35
RFK-204	ENST00000479197	TMEM183B	Q1AE95	376 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	SMUG1	Q53HV7	270 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	FAM222A	Q5U5X8	452 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	ZFAND6	Q6FIF0	208 aa		12.88	□□□□□ -0.35
RFK-204	ENST00000479197	TRBV6-1	A0A0K0K1D8	114 aa		12.87	□□□□□ -0.35
RFK-204	ENST00000479197	GCG	P01275	180 aa		12.87	□□□□□ -0.35
RFK-204	ENST00000479197	ANXA2R	Q3ZCQ2	193 aa		12.87	□□□□□ -0.35
RFK-204	ENST00000479197	MUC21	Q5SSG8	566 aa		12.87	□□□□□ -0.35
RFK-204	ENST00000479197	ZNF680	Q8NEM1	530 aa		12.87	□□□□□ -0.35
RFK-204	ENST00000479197	VAX2	Q9UIW0	290 aa		12.87	□□□□□ -0.35
RFK-204	ENST00000479197	ZFP30	Q9Y2G7	519 aa		12.87	□□□□□ -0.35
RFK-204	ENST00000479197	S100A9	P06702	114 aa	Known RBP	12.86	□□□□□ -0.35
RFK-204	ENST00000479197	ZNF80	P51504	273 aa	Predicted RBP	12.86	□□□□□ -0.35
RFK-204	ENST00000479197	CASC10	Q5T4H9	136 aa		12.86	□□□□□ -0.35
RFK-204	ENST00000479197	C11orf52	Q96A22	123 aa		12.86	□□□□□ -0.35
RFK-204	ENST00000479197	LYRM9	A8MSI8	78 aa		12.85	□□□□□ -0.35
RFK-204	ENST00000479197	PDE6D	O43924	150 aa		12.85	□□□□□ -0.35
RFK-204	ENST00000479197	LTA	P01374	205 aa		12.85	□□□□□ -0.35
RFK-204	ENST00000479197	C12orf74	Q32Q52	190 aa		12.85	□□□□□ -0.35
RFK-204	ENST00000479197	FAM159A	Q6UWV7	190 aa		12.85	□□□□□ -0.35
RFK-204	ENST00000479197	ZNF767P	Q75MW2	155 aa		12.85	□□□□□ -0.35
RFK-204	ENST00000479197	NAGK	Q9UJ70	344 aa		12.85	□□□□□ -0.35
RFK-204	ENST00000479197	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	12.85	□□□□□ -0.35
RFK-204	ENST00000479197	SNURFL	B1AK76	121 aa		12.84	□□□□□ -0.35
RFK-204	ENST00000479197	PFN1	P07737	140 aa	Known RBP	12.84	□□□□□ -0.35
RFK-204	ENST00000479197		Q6ZTC4	211 aa		12.84	□□□□□ -0.35
RFK-204	ENST00000479197	C11orf72	Q8NBR9	251 aa		12.84	□□□□□ -0.35
RFK-204	ENST00000479197	TP53TG3	Q9ULZ0	132 aa		12.84	□□□□□ -0.35
RFK-204	ENST00000479197	TDRG1	Q3Y452	100 aa		12.83	□□□□□ -0.35
RFK-204	ENST00000479197	COX8C	Q7Z4L0	72 aa		12.83	□□□□□ -0.35
RFK-204	ENST00000479197	PHLDA1	Q8WV24	401 aa	Predicted RBP	12.83	□□□□□ -0.35
RFK-204	ENST00000479197	NOP10	Q9NPE3	64 aa	Known RBP	12.83	□□□□□ -0.35
RFK-204	ENST00000479197	NUPR2	A6NF83	97 aa		12.83	□□□□□ -0.36
RFK-204	ENST00000479197	RPL35	P42766	123 aa	Known RBP	12.83	□□□□□ -0.36
RFK-204	ENST00000479197	IBA57	Q5T440	356 aa	Known RBP	12.83	□□□□□ -0.36
RFK-204	ENST00000479197	ZC2HC1A	Q96GY0	325 aa		12.83	□□□□□ -0.36
RFK-204	ENST00000479197	GSN-AS1	Q9NRJ2	163 aa		12.83	□□□□□ -0.36
RFK-204	ENST00000479197	TRGV11	A0A075B6L2	103 aa		12.82	□□□□□ -0.36
RFK-204	ENST00000479197	RBFOX3	A6NFN3	312 aa		12.82	□□□□□ -0.36
RFK-204	ENST00000479197	DAD1	P61803	113 aa		12.82	□□□□□ -0.36
RFK-204	ENST00000479197	DAZ2	Q13117	558 aa	Known RBP	12.82	□□□□□ -0.36
RFK-204	ENST00000479197	TMEM183A	Q8IXX5	376 aa		12.82	□□□□□ -0.36
RFK-204	ENST00000479197	KCNS1	Q96KK3	526 aa		12.82	□□□□□ -0.36
RFK-204	ENST00000479197	DERL1	Q9BUN8	251 aa		12.82	□□□□□ -0.36
RFK-204	ENST00000479197	DYNC2H1	Q8NCM8	4307 aa	Known RBP	12.81	□□□□□ -0.36
RFK-204	ENST00000479197	TCL1A	P56279	114 aa		12.81	□□□□□ -0.36
RFK-204	ENST00000479197	ZNF415	Q09FC8	603 aa		12.81	□□□□□ -0.36
RFK-204	ENST00000479197	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.81	□□□□□ -0.36
RFK-204	ENST00000479197	BAGE2	Q86Y30	109 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms