RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 KIF20BQ96Q89 1820 aa3.65□□□□□ -1.82
RC3H1-204ENST00000479099 ABCC5O15440 1437 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 TRAV14DV4A0A0A6YYC5 116 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 TRAV3A0A0B4J244 114 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 TRAPPC2P0DI81 140 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 TRAPPC2BP0DI82 140 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 C1orf134Q5TEV5 83 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 Q6ZS52 159 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 KRTAP7-1Q8IUC3 87 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 Q8N8P6 123 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 C10orf82Q8WW14 230 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 MYLKQ15746 1914 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 PLEKHH2Q8IVE3 1493 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 IFT140Q96RY7 1462 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 MALRD1Q5VYJ5 2156 aa3.65□□□□□ -1.83
RC3H1-204ENST00000479099 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 K7EP34 96 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 MRPS14O60783 128 aaKnown RBP3.64□□□□□ -1.83
RC3H1-204ENST00000479099 GAS8-AS1O95177 125 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 ATP5EP56381 51 aaPredicted RBP3.64□□□□□ -1.83
RC3H1-204ENST00000479099 EIF4EBP1Q13541 118 aaPredicted RBP3.64□□□□□ -1.83
RC3H1-204ENST00000479099 PEA15Q15121 130 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 C5orf38Q86SI9 138 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 LYPD6Q86Y78 171 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 LINC00052Q96N35 136 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 CXCL16Q9H2A7 254 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 C14orf132Q9NPU4 83 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 SCN4AP35499 1836 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 CHD3Q12873 2000 aaKnown RBP3.64□□□□□ -1.83
RC3H1-204ENST00000479099 ERVK-7P63135 1459 aa3.64□□□□□ -1.83
RC3H1-204ENST00000479099 CCDC88CQ9P219 2028 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 C10orf71Q711Q0 1435 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 DOCK9Q9BZ29 2069 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 UBE2L5PA0A1B0GUS4 154 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 WISP3O95389 354 aaPredicted RBP3.63□□□□□ -1.83
RC3H1-204ENST00000479099 CGAP01215 116 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 CRPP02741 224 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 PIPP12273 146 aaPredicted RBP3.63□□□□□ -1.83
RC3H1-204ENST00000479099 ASIPP42127 132 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 UBE2L3P68036 154 aaKnown RBP3.63□□□□□ -1.83
RC3H1-204ENST00000479099 C14orf177Q52M58 125 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 UNQ5815/PRO19632Q6UWF5 114 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 ZNF720Q7Z2F6 126 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 LINC00269Q8N2A0 174 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 MINOS1-NBL1R4GNA1 71 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 S4R3C0 116 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 LRRIQ1Q96JM4 1722 aa3.63□□□□□ -1.83
RC3H1-204ENST00000479099 DOCK1Q14185 1865 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 ABCA7Q8IZY2 2146 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 TNRC6AQ8NDV7 1962 aaKnown RBP3.62□□□□□ -1.83
RC3H1-204ENST00000479099 IGKV1D-42A0A075B6H8 117 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 IGHV3OR16-8A0A075B7F1 116 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 TRAV1-1A0A0B4J248 108 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 PIRTP0C851 137 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 MGST1P10620 155 aaKnown RBP3.62□□□□□ -1.83
RC3H1-204ENST00000479099 SNCAP37840 140 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 RPL26P61254 145 aaKnown RBP3.62□□□□□ -1.83
RC3H1-204ENST00000479099 LINC00301Q8NCQ3 95 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 MAPK1IP1LQ8NDC0 245 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 SMIM7Q9BQ49 75 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 SLX4Q8IY92 1834 aa3.62□□□□□ -1.83
RC3H1-204ENST00000479099 MARF1Q9Y4F3 1742 aaKnown RBP3.61□□□□□ -1.83
RC3H1-204ENST00000479099 PPLO60437 1756 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 LOC107984156A0A0G2JMH3 177 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 F8W1H4 67 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 GYPAP02724 150 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 INSL4Q14641 139 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 TDRG1Q3Y452 100 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 ZNF826PQ6ZT77 177 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 ARL17AQ8IVW1 177 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 OR8B2Q96RD0 313 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 S100A13Q99584 98 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 REG4Q9BYZ8 158 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 SHANK3Q9BYB0 1731 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 CLIP1P30622 1438 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 MYO9BQ13459 2157 aa3.61□□□□□ -1.83
RC3H1-204ENST00000479099 IGHV3-64A0A075B6Q5 118 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 A0A087WSZ3 146 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 GNGT2O14610 69 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 NMBP08949 121 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 DSCR4P56555 118 aaPredicted RBP3.6□□□□□ -1.83
RC3H1-204ENST00000479099 SPANXN5Q5MJ07 72 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 SLC25A26Q70HW3 274 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 LINC00612Q8N6U2 182 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 DYNLRB2Q8TF09 96 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 MUCL1Q96DR8 90 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 MYH8P13535 1937 aa3.6□□□□□ -1.83
RC3H1-204ENST00000479099 POLA1P09884 1462 aaPredicted RBP3.6□□□□□ -1.83
RC3H1-204ENST00000479099 TOPAZ1Q8N9V7 1692 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 CPAMD8Q8IZJ3 1885 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 IBA57-AS1B1ANH7 110 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 E7EUB6 86 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 C5orf67F2Z3F1 127 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 UBL3O95164 117 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 BAALC-AS2P0C853 105 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 SSR2P43308 183 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 ZNF345Q14585 488 aa3.59□□□□□ -1.83
RC3H1-204ENST00000479099 KRTAP25-1Q3LHN0 102 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms