RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 Q9H3A6 140 aa15.75■□□□□ 0.11
C9orf3-216ENST00000478603 TTC32Q5I0X7 151 aa15.74■□□□□ 0.11
C9orf3-216ENST00000478603 ARPC5LQ9BPX5 153 aa15.74■□□□□ 0.11
C9orf3-216ENST00000478603 CSN1S1P47710 185 aa15.73■□□□□ 0.11
C9orf3-216ENST00000478603 HSPG2P98160 4391 aa15.72■□□□□ 0.11
C9orf3-216ENST00000478603 RPL12P30050 165 aaKnown RBP15.72■□□□□ 0.11
C9orf3-216ENST00000478603 MUC21Q5SSG8 566 aa15.72■□□□□ 0.11
C9orf3-216ENST00000478603 SCGB1C1Q8TD33 95 aa15.72■□□□□ 0.11
C9orf3-216ENST00000478603 ST6GAL2Q96JF0 529 aa15.72■□□□□ 0.11
C9orf3-216ENST00000478603 MBD2Q9UBB5 411 aa15.72■□□□□ 0.11
C9orf3-216ENST00000478603 LRP1BQ9NZR2 4599 aa15.72■□□□□ 0.11
C9orf3-216ENST00000478603 IFNA5P01569 189 aa15.71■□□□□ 0.11
C9orf3-216ENST00000478603 PET100P0DJ07 73 aa15.71■□□□□ 0.11
C9orf3-216ENST00000478603 KHDC3LQ587J8 217 aa15.71■□□□□ 0.11
C9orf3-216ENST00000478603 LYPD1Q8N2G4 141 aa15.71■□□□□ 0.11
C9orf3-216ENST00000478603 WFDC1Q9HC57 220 aa15.71■□□□□ 0.11
C9orf3-216ENST00000478603 TRBV7-9A0A0J9YWB2 115 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 RBAKDNA6NC62 111 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 PAX4O43316 350 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 DEFA1P59665 94 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 DEFA3P59666 94 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 ZNF415Q09FC8 603 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 ZNF266Q14584 549 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 KRTAP4-5Q9BYR2 181 aa15.7■□□□□ 0.1
C9orf3-216ENST00000478603 A0A1W2PPQ1 181 aa15.69■□□□□ 0.1
C9orf3-216ENST00000478603 DIRC3C9JPN6 131 aa15.69■□□□□ 0.1
C9orf3-216ENST00000478603 TAS2R45P59539 299 aa15.69■□□□□ 0.1
C9orf3-216ENST00000478603 HYLS1Q96M11 299 aa15.69■□□□□ 0.1
C9orf3-216ENST00000478603 SPATA12Q7Z6I5 190 aa15.68■□□□□ 0.1
C9orf3-216ENST00000478603 MDFICQ9P1T7 246 aa15.68■□□□□ 0.1
C9orf3-216ENST00000478603 RPH3ALQ9UNE2 315 aa15.68■□□□□ 0.1
C9orf3-216ENST00000478603 ICOSQ9Y6W8 199 aa15.68■□□□□ 0.1
C9orf3-216ENST00000478603 FHL2Q14192 279 aa15.67■□□□□ 0.1
C9orf3-216ENST00000478603 C8orf49Q96NF6 230 aa15.67■□□□□ 0.1
C9orf3-216ENST00000478603 PRO0255Q9UI72 69 aa15.67■□□□□ 0.1
C9orf3-216ENST00000478603 CRYBA4P53673 196 aa15.66■□□□□ 0.1
C9orf3-216ENST00000478603 TMEM183BQ1AE95 376 aa15.66■□□□□ 0.1
C9orf3-216ENST00000478603 Q6AWC8 147 aa15.66■□□□□ 0.1
C9orf3-216ENST00000478603 TMEM183AQ8IXX5 376 aa15.66■□□□□ 0.1
C9orf3-216ENST00000478603 OTORQ9NRC9 128 aa15.66■□□□□ 0.1
C9orf3-216ENST00000478603 HHLA3Q9XRX5 114 aa15.66■□□□□ 0.1
C9orf3-216ENST00000478603 ABCA13Q86UQ4 5058 aa15.66■□□□□ 0.1
C9orf3-216ENST00000478603 PGPA6NDG6 321 aa15.65■□□□□ 0.1
C9orf3-216ENST00000478603 SIVA1O15304 175 aa15.64■□□□□ 0.09
C9orf3-216ENST00000478603 NXPH4O95158 308 aa15.64■□□□□ 0.09
C9orf3-216ENST00000478603 SFTA3P0C7M3 94 aa15.64■□□□□ 0.09
C9orf3-216ENST00000478603 LINC00315P59091 139 aa15.64■□□□□ 0.09
C9orf3-216ENST00000478603 RAB2AP61019 212 aa15.64■□□□□ 0.09
C9orf3-216ENST00000478603 ACOT6Q3I5F7 207 aaPredicted RBP15.64■□□□□ 0.09
C9orf3-216ENST00000478603 NAGKQ9UJ70 344 aa15.64■□□□□ 0.09
C9orf3-216ENST00000478603 LENEPQ9Y5L5 61 aa15.64■□□□□ 0.09
C9orf3-216ENST00000478603 HMGB3O15347 200 aaKnown RBP15.63■□□□□ 0.09
C9orf3-216ENST00000478603 CDK2AP2O75956 126 aa15.63■□□□□ 0.09
C9orf3-216ENST00000478603 KRTAP10-2P60368 255 aa15.63■□□□□ 0.09
C9orf3-216ENST00000478603 FAM159AQ6UWV7 190 aa15.63■□□□□ 0.09
C9orf3-216ENST00000478603 CMTM2Q8TAZ6 248 aa15.63■□□□□ 0.09
C9orf3-216ENST00000478603 ZNF479Q96JC4 524 aa15.63■□□□□ 0.09
C9orf3-216ENST00000478603 TRGV4A0A0C4DH28 118 aa15.62■□□□□ 0.09
C9orf3-216ENST00000478603 A0A1W2PPV4 95 aa15.62■□□□□ 0.09
C9orf3-216ENST00000478603 SLAQ13239 276 aa15.62■□□□□ 0.09
C9orf3-216ENST00000478603 GOLT1AQ6ZVE7 132 aa15.62■□□□□ 0.09
C9orf3-216ENST00000478603 TRGV11A0A075B6L2 103 aa15.61■□□□□ 0.09
C9orf3-216ENST00000478603 BTF3P20290 206 aaKnown RBP15.61■□□□□ 0.09
C9orf3-216ENST00000478603 MRPL23Q16540 153 aaKnown RBP15.61■□□□□ 0.09
C9orf3-216ENST00000478603 LYPD5Q6UWN5 251 aa15.61■□□□□ 0.09
C9orf3-216ENST00000478603 PQLC2Q6ZP29 291 aa15.61■□□□□ 0.09
C9orf3-216ENST00000478603 TMED6Q8WW62 240 aa15.61■□□□□ 0.09
C9orf3-216ENST00000478603 ALG5Q9Y673 324 aa15.61■□□□□ 0.09
C9orf3-216ENST00000478603 TRAV8-1A0A0A6YYK1 113 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 F6UZH7 168 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 GNG5P63218 68 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 FAM74A1Q5RGS3 127 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 Q6ZRN7 208 aaPredicted RBP15.6■□□□□ 0.09
C9orf3-216ENST00000478603 OR10G4Q8NGN3 311 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 OR10G9Q8NGN4 311 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 OR10G7Q8NGN6 311 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 RASL10AQ92737 203 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 TVP23CQ96ET8 276 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 SPXQ9BT56 116 aa15.6■□□□□ 0.09
C9orf3-216ENST00000478603 APOBP04114 4563 aaKnown RBP15.6■□□□□ 0.09
C9orf3-216ENST00000478603 GNRH2O43555 120 aa15.59■□□□□ 0.09
C9orf3-216ENST00000478603 TNFRSF18Q9Y5U5 241 aa15.59■□□□□ 0.09
C9orf3-216ENST00000478603 K7EQD1 137 aa15.58■□□□□ 0.08
C9orf3-216ENST00000478603 NEGR1Q7Z3B1 354 aa15.58■□□□□ 0.08
C9orf3-216ENST00000478603 MAPKAPK5-AS1Q8N8E1 139 aa15.58■□□□□ 0.08
C9orf3-216ENST00000478603 SGK494Q96LW2 274 aa15.58■□□□□ 0.08
C9orf3-216ENST00000478603 DNAH5Q8TE73 4624 aa15.57■□□□□ 0.08
C9orf3-216ENST00000478603 ARL14EPLP0DKL9 152 aa15.57■□□□□ 0.08
C9orf3-216ENST00000478603 TDRG1Q3Y452 100 aa15.57■□□□□ 0.08
C9orf3-216ENST00000478603 IQCF2Q8IXL9 164 aa15.57■□□□□ 0.08
C9orf3-216ENST00000478603 HSD17B11Q8NBQ5 300 aa15.57■□□□□ 0.08
C9orf3-216ENST00000478603 TREM1Q9NP99 234 aa15.57■□□□□ 0.08
C9orf3-216ENST00000478603 IGHV3-16A0A0C4DH30 117 aa15.56■□□□□ 0.08
C9orf3-216ENST00000478603 GYPEP15421 78 aa15.56■□□□□ 0.08
C9orf3-216ENST00000478603 SRIP30626 198 aa15.56■□□□□ 0.08
C9orf3-216ENST00000478603 CDC34P49427 236 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-216ENST00000478603 TRAV21A0A0B4J279 112 aa15.55■□□□□ 0.08
C9orf3-216ENST00000478603 TYMSP04818 313 aa15.55■□□□□ 0.08
C9orf3-216ENST00000478603 ARL6IP6Q8N6S5 226 aa15.55■□□□□ 0.08
C9orf3-216ENST00000478603 TRAV4A0A0B4J268 109 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms