RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 VWFP04275 2813 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 NUP210Q8TEM1 1887 aaPredicted RBP-0.37□□□□□ -2.47
HPS3-205ENST00000478525 BIVM-ERCC5R4GMW8 1640 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 A0A087WUJ7 227 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 TMEM114B3SHH9 223 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 C9JAW5 83 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 H7BYZ3 331 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 TPST1O60507 370 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 CST7O76096 145 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 LYPLA2O95372 231 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 SERPINA1P01009 418 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 SAA1P0DJI8 122 aaPredicted RBP-0.37□□□□□ -2.47
HPS3-205ENST00000478525 TPT1P13693 172 aaKnown RBP-0.37□□□□□ -2.47
HPS3-205ENST00000478525 IDO1P14902 403 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 ATP5G3P48201 142 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 TMBIM6P55061 237 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 DEFA1P59665 94 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 WFDC2Q14508 124 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 LIN52Q52LA3 116 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 LINC00269Q8N2A0 174 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 NUP35Q8NFH5 326 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 OR10X1Q8NGY0 326 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 CCL4L1Q8NHW4 92 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 SMIM11BQ8TCY0 68 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 TMEM141Q96I45 108 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 CCDC42Q96M95 316 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 LIMD2Q9BT23 127 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 PYCARDQ9ULZ3 195 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 ASB4Q9Y574 426 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 VIRMAQ69YN4 1812 aaKnown RBP-0.37□□□□□ -2.47
HPS3-205ENST00000478525 WNK3Q9BYP7 1800 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 TNXBP22105 4242 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 KIAA0100Q14667 2235 aaKnown RBP-0.37□□□□□ -2.47
HPS3-205ENST00000478525 USP54Q70EL1 1684 aa-0.37□□□□□ -2.47
HPS3-205ENST00000478525 PI4KAP42356 2102 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 NBDYA0A0U1RRE5 68 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 C3orf85A0A1B0GTC6 90 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 TMEM189A5PLL7 270 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 G3V2T6 193 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 H3BQV1 296 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 M0QX08 132 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 M0R3E3 92 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 CETN3O15182 167 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 HMGB3O15347 200 aaKnown RBP-0.38□□□□□ -2.47
HPS3-205ENST00000478525 BANF1O75531 89 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 CRHP06850 196 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 NMBP08949 121 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 SPINK8P0C7L1 97 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 FABP4P15090 132 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 SPRR2BP35325 72 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 ARPP19P56211 112 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 HSPE1P61604 102 aaKnown RBP-0.38□□□□□ -2.47
HPS3-205ENST00000478525 HBBP68871 147 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 ITGB3BPQ13352 177 aaPredicted RBP-0.38□□□□□ -2.47
HPS3-205ENST00000478525 AKR1C8PQ5T2L2 129 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 Q5VSD8 79 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 UNQ5815/PRO19632Q6UWF5 114 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 PHF5AQ7RTV0 110 aaKnown RBP-0.38□□□□□ -2.47
HPS3-205ENST00000478525 SIGMAR1Q99720 223 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 RTL8AQ9BWD3 113 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 CNFNQ9BYD5 112 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 TMEM242Q9NWH2 141 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 PRELID3BQ9Y3B1 194 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 MPC1Q9Y5U8 109 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 RTL9Q8NET4 1388 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 NBEAL1Q6ZS30 2694 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 LRP1BQ9NZR2 4599 aa-0.38□□□□□ -2.47
HPS3-205ENST00000478525 HECTD4Q9Y4D8 3996 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 ZNF142P52746 1687 aaPredicted RBP-0.39□□□□□ -2.47
HPS3-205ENST00000478525 CDK12Q9NYV4 1490 aaPredicted RBP-0.39□□□□□ -2.47
HPS3-205ENST00000478525 TRBV10-1A0A0K0K1A3 114 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 LOC101927531A0A1B0GV80 90 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 LOC107986453A0A1B0GWG9 222 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 RIIAD1A6NNX1 92 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 B4DSR2 109 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 H7C1C5 153 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 KPNA4O00629 521 aaPredicted RBP-0.39□□□□□ -2.47
HPS3-205ENST00000478525 PIN1P1O15428 100 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 PFDN1O60925 122 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 MT-ND6P03923 174 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 TRGC2P03986 189 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 CCKP06307 115 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 PYYP10082 97 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 S100A3P33764 101 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 PPP1R2P41236 205 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 SRP9P49458 86 aaKnown RBP-0.39□□□□□ -2.47
HPS3-205ENST00000478525 LCN6P62502 163 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 RGS21Q2M5E4 152 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 FAM74A4Q5TZK3 123 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 SMIM7Q9BQ49 75 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 PBDC1Q9BVG4 233 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 RNASE7Q9H1E1 156 aaKnown RBP-0.39□□□□□ -2.47
HPS3-205ENST00000478525 ARL2BPQ9Y2Y0 163 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 FAM32AQ9Y421 112 aaKnown RBP-0.39□□□□□ -2.47
HPS3-205ENST00000478525 MYH3P11055 1940 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 PCLOQ9Y6V0 5065 aa-0.39□□□□□ -2.47
HPS3-205ENST00000478525 PPRC1Q5VV67 1664 aaKnown RBP-0.4□□□□□ -2.47
HPS3-205ENST00000478525 NF1P21359 2839 aa-0.4□□□□□ -2.47
HPS3-205ENST00000478525 TRAV2A0A0B4J234 112 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms