RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 STAG3L3P0CL85 134 aa16.31■□□□□ 0.2
C9orf3-215ENST00000478473 ATP6V0CP27449 155 aa16.31■□□□□ 0.2
C9orf3-215ENST00000478473 CCL18P55774 89 aa16.31■□□□□ 0.2
C9orf3-215ENST00000478473 FAM74A1Q5RGS3 127 aa16.31■□□□□ 0.2
C9orf3-215ENST00000478473 GNPNAT1Q96EK6 184 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-215ENST00000478473 ATG101Q9BSB4 218 aa16.31■□□□□ 0.2
C9orf3-215ENST00000478473 TP53TG3Q9ULZ0 132 aa16.31■□□□□ 0.2
C9orf3-215ENST00000478473 KLF12Q9Y4X4 402 aa16.31■□□□□ 0.2
C9orf3-215ENST00000478473 IGLV2-18A0A075B6J9 118 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 RNF222A6NCQ9 220 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 PGPA6NDG6 321 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 RGS13O14921 159 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 MBP02144 154 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 OR5I1Q13606 314 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 HSD17B11Q8NBQ5 300 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 TMPRSS5Q9H3S3 457 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 LINC00588Q9Y4M8 146 aa16.3■□□□□ 0.2
C9orf3-215ENST00000478473 CDC34P49427 236 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-215ENST00000478473 TNFSF18Q9UNG2 199 aa16.29■□□□□ 0.2
C9orf3-215ENST00000478473 RGS21Q2M5E4 152 aa16.28■□□□□ 0.2
C9orf3-215ENST00000478473 TDRG1Q3Y452 100 aa16.28■□□□□ 0.2
C9orf3-215ENST00000478473 CMTM2Q8TAZ6 248 aa16.28■□□□□ 0.2
C9orf3-215ENST00000478473 RAB24Q969Q5 203 aa16.28■□□□□ 0.2
C9orf3-215ENST00000478473 ST6GAL2Q96JF0 529 aa16.28■□□□□ 0.2
C9orf3-215ENST00000478473 MUC4Q99102 2169 aa16.28■□□□□ 0.2
C9orf3-215ENST00000478473 G3V3Q6 166 aa16.27■□□□□ 0.2
C9orf3-215ENST00000478473 ARL14EPLP0DKL9 152 aa16.27■□□□□ 0.2
C9orf3-215ENST00000478473 INO80EQ8NBZ0 244 aaPredicted RBP16.27■□□□□ 0.2
C9orf3-215ENST00000478473 VSIG2Q96IQ7 327 aa16.27■□□□□ 0.2
C9orf3-215ENST00000478473 TRGV2A0A075B6R0 118 aa16.26■□□□□ 0.19
C9orf3-215ENST00000478473 TRGV1A0A0A0MS02 117 aa16.26■□□□□ 0.19
C9orf3-215ENST00000478473 PRSS29PA6NIE9 313 aa16.26■□□□□ 0.19
C9orf3-215ENST00000478473 HYLS1Q96M11 299 aa16.26■□□□□ 0.19
C9orf3-215ENST00000478473 ARPC5LQ9BPX5 153 aa16.26■□□□□ 0.19
C9orf3-215ENST00000478473 UPK3BQ9BT76 320 aa16.26■□□□□ 0.19
C9orf3-215ENST00000478473 NBDYA0A0U1RRE5 68 aa16.25■□□□□ 0.19
C9orf3-215ENST00000478473 SERTM2A0A1B0GWG4 89 aa16.25■□□□□ 0.19
C9orf3-215ENST00000478473 ZNF415Q09FC8 603 aa16.25■□□□□ 0.19
C9orf3-215ENST00000478473 OR2T35Q8NGX2 323 aa16.25■□□□□ 0.19
C9orf3-215ENST00000478473 HMGB3O15347 200 aaKnown RBP16.24■□□□□ 0.19
C9orf3-215ENST00000478473 GCHFRP30047 84 aa16.24■□□□□ 0.19
C9orf3-215ENST00000478473 SOHLH1Q5JUK2 328 aa16.24■□□□□ 0.19
C9orf3-215ENST00000478473 C1orf134Q5TEV5 83 aa16.24■□□□□ 0.19
C9orf3-215ENST00000478473 GOLT1AQ6ZVE7 132 aa16.24■□□□□ 0.19
C9orf3-215ENST00000478473 SSX7Q7RTT5 188 aa16.24■□□□□ 0.19
C9orf3-215ENST00000478473 TVP23CQ96ET8 276 aa16.24■□□□□ 0.19
C9orf3-215ENST00000478473 SH3BGRL3Q9H299 93 aa16.24■□□□□ 0.19
C9orf3-215ENST00000478473 A0A0J9YY99 117 aa16.23■□□□□ 0.19
C9orf3-215ENST00000478473 RPL7L1Q6DKI1 246 aaKnown RBP16.23■□□□□ 0.19
C9orf3-215ENST00000478473 C5orf17Q8NAS9 161 aa16.23■□□□□ 0.19
C9orf3-215ENST00000478473 SPXQ9BT56 116 aa16.23■□□□□ 0.19
C9orf3-215ENST00000478473 PKHD1P08F94 4074 aa16.23■□□□□ 0.19
C9orf3-215ENST00000478473 RASL10AQ92737 203 aa16.22■□□□□ 0.19
C9orf3-215ENST00000478473 ACTR3CQ9C0K3 210 aaPredicted RBP16.22■□□□□ 0.19
C9orf3-215ENST00000478473 TMEM167BQ9NRX6 74 aa16.22■□□□□ 0.19
C9orf3-215ENST00000478473 MDFICQ9P1T7 246 aa16.22■□□□□ 0.19
C9orf3-215ENST00000478473 PKD1P98161 4303 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 TRGV11A0A075B6L2 103 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 FXYD6-FXYD2A0A087WZ82 144 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 A0A096LPF7 62 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 BORCS7-ASMTA0A0B4J1R7 106 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 CXorf1O96002 111 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 SLAQ13239 276 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 ESRGQ1W209 222 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 MUC21Q5SSG8 566 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 FAM159AQ6UWV7 190 aa16.21■□□□□ 0.19
C9orf3-215ENST00000478473 TRAV8-1A0A0A6YYK1 113 aa16.2■□□□□ 0.18
C9orf3-215ENST00000478473 TCRAP04437 139 aa16.2■□□□□ 0.18
C9orf3-215ENST00000478473 IQCF2Q8IXL9 164 aa16.2■□□□□ 0.18
C9orf3-215ENST00000478473 Q9H8V8 135 aa16.2■□□□□ 0.18
C9orf3-215ENST00000478473 MRPL16Q9NX20 251 aaKnown RBP16.2■□□□□ 0.18
C9orf3-215ENST00000478473 MRPS16Q9Y3D3 137 aaKnown RBP16.2■□□□□ 0.18
C9orf3-215ENST00000478473 HERC2O95714 4834 aa16.19■□□□□ 0.18
C9orf3-215ENST00000478473 TRAV21A0A0B4J279 112 aa16.19■□□□□ 0.18
C9orf3-215ENST00000478473 TAAR5O14804 337 aa16.19■□□□□ 0.18
C9orf3-215ENST00000478473 GNG5P63218 68 aa16.19■□□□□ 0.18
C9orf3-215ENST00000478473 TREM1Q9NP99 234 aa16.19■□□□□ 0.18
C9orf3-215ENST00000478473 PRO0255Q9UI72 69 aa16.19■□□□□ 0.18
C9orf3-215ENST00000478473 A0A1W2PRE2 83 aa16.18■□□□□ 0.18
C9orf3-215ENST00000478473 GGTLC3B5MD39 225 aa16.18■□□□□ 0.18
C9orf3-215ENST00000478473 FHL2Q14192 279 aa16.18■□□□□ 0.18
C9orf3-215ENST00000478473 RPH3ALQ9UNE2 315 aa16.18■□□□□ 0.18
C9orf3-215ENST00000478473 DNAH11Q96DT5 4516 aa16.17■□□□□ 0.18
C9orf3-215ENST00000478473 FBLL1A6NHQ2 334 aaKnown RBP16.17■□□□□ 0.18
C9orf3-215ENST00000478473 IGLV2-11P01706 119 aa16.17■□□□□ 0.18
C9orf3-215ENST00000478473 ZNF726P1Q15940 193 aa16.17■□□□□ 0.18
C9orf3-215ENST00000478473 TMEM183BQ1AE95 376 aa16.17■□□□□ 0.18
C9orf3-215ENST00000478473 TMEM183AQ8IXX5 376 aa16.17■□□□□ 0.18
C9orf3-215ENST00000478473 CYTL1Q9NRR1 136 aa16.17■□□□□ 0.18
C9orf3-215ENST00000478473 EPDR1Q9UM22 224 aa16.17■□□□□ 0.18
C9orf3-215ENST00000478473 IGHV3-16A0A0C4DH30 117 aa16.16■□□□□ 0.18
C9orf3-215ENST00000478473 CTXND1A0A1B0GTU2 59 aa16.16■□□□□ 0.18
C9orf3-215ENST00000478473 CRYBA4P53673 196 aa16.16■□□□□ 0.18
C9orf3-215ENST00000478473 SUMO1P63165 101 aaKnown RBP16.16■□□□□ 0.18
C9orf3-215ENST00000478473 C6orf223Q8N319 242 aa16.16■□□□□ 0.18
C9orf3-215ENST00000478473 KCNS1Q96KK3 526 aa16.16■□□□□ 0.18
C9orf3-215ENST00000478473 DYNC1H1Q14204 4646 aaKnown RBP16.15■□□□□ 0.18
C9orf3-215ENST00000478473 A0A1W2PPQ1 181 aa16.15■□□□□ 0.18
C9orf3-215ENST00000478473 K7EQM0 130 aa16.15■□□□□ 0.18
C9orf3-215ENST00000478473 PAX4O43316 350 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms